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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein


GI:116628215
NCBI info 116628215 Gene: - Synonym: STER_1479
SCL: @Intracellular Length 531 COG -
Species: Streptococcus_thermophilus_LMD-9 Location 1385233..1386828 Strand: -
Product: septation ring formation regulator EzrA
Sequence:
MFDLPINEEIEEVKNLHLIGQSQTTFREWNQKWIDISTNSFADIENHIFEAENMNDNFHFFKASAEINNIESQLDLVEEDIKSIREAISSLKEQEEKNSA
RVKHALDLYEELQNSIEGNSDNFGSTLDEITKQLKNIESEFAEFVTLNSSGDPVEASSILDRAEEHTIALGQITEKIPAIVAKLEDDFPDQLDDLESGYR
KLIEQNYHFPEKNIERHFQEIREAIRSNSSELVSLDLDRAEEKNADIQEKIDNLYSIFEREIASYKVVMRQKKILPDYLKHAKENNKKLQEELERLMLTY
IFDETYEAAVRSFTSDISSVETAVLPTLENFDNQVKPFSELEKIFEKSLNTLSAVENGQVEVFENLRAIEKNEAKARDELDVYIDKLHVIKRYMEKRNLP
GIPESFLSVFFSTSAQIEALMDELSRGRINIDAVMRLTETSKNAIEHLEKTAYLVVQNATLTEQLLQYSNRYRSFEPAVQSSFEHALKLFEVDHDYDASL
EEISYALEKVEPGVTDRFVSSYEKTREQIRM


This is a pseudogene


Protein clustering result of GI: 116628215
protein GI: 116628215 is in cluster LaCOG01448
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene

Copyright © 2010 Miaomiao Zhou
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