LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Protein

GI:116627680
NCBI info	116627680	Gene:	-	Synonym:	STER_0865
SCL:	@Intracellular	Length	84	COG	-
Species:	Streptococcus_thermophilus_LMD-9	Location	799488..799742	Strand:	+
Product:	hypothetical protein
Sequence:	MVSKDYNCIVDGPKSKDNYTYYSLKVKDQGKETSYTVFFPTKSKEIALFLEPSDAKEPLKGQMLFAFNKKKKPDYYDYVKKYLK

This is a pseudogene

Protein clustering result of GI: 116627680

protein GI: 116627680 is in cluster LaCOG03032
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color Legend:

Corrected sequence

Pseudo gene

Protein Domain structure of LaCOG03032 (Scale up the web page to see more details)

Multiple Sequence alignment of LaCOG03032

Color Legend:

Corrected sequence

Pseudo gene

Gene made from mutiple pseudogenes


116512651	Lactococcus_lactis_cremoris_SK11	mkndfivnrgrvtkyKklLLmvfgLvlmlslltgcKgskniqGtWhaQngdernltlkFt
116627680	Streptococcus_thermophilus_LMD-9	------------------------------------------------------------
55820869	Streptococcus_thermophilus_LMG_18311	--------------MKRWLLgLLALLCLVlMAACSKSAPSLEGEWQVQDAlKKDYMIvFK
999990065_55822785	Streptococcus_thermophilus_CNRZ1066	--------------MKRWLLgLLALLCLVlMAACSKSAPSLEGEWQVQDAlKKDYMIvFK

116512651	Lactococcus_lactis_cremoris_SK11	dkKVmIegdeYkYTqnaigiengirYYg--ieenGK--nYsiiFPeKdKnIALmiEPest
116627680	Streptococcus_thermophilus_LMD-9	-----mvskDYNciVDGPKSKDNYtYYSLKVKDQGKETSYTVFFPTKSKEIALFLEPSDA
55820869	Streptococcus_thermophilus_LMG_18311	KDKVKIgeqDYNYTVDGPKSKDDFiYYSLKVKDrGKETSYTVFFPTKSKEIALFLEPSDA
999990065_55822785	Streptococcus_thermophilus_CNRZ1066	KDKVKIgex-----MDGPKSKDDFiYYSLKVKDQGKETSYTVFFPTKSKEIALFLEPSDA

116512651	Lactococcus_lactis_cremoris_SK11	dnyfrGtliFAmNKKenPsYseYaerYin
116627680	Streptococcus_thermophilus_LMD-9	KEPLKGQMLFAFNKKKKPDYYDYVKKYlK
55820869	Streptococcus_thermophilus_LMG_18311	KEPLKGQMLFAFNKKKKPDYYDYVKKYMK
999990065_55822785	Streptococcus_thermophilus_CNRZ1066	KEPLKGQMLFAFNKKKKPDYYDYVKKYMK