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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein


GI:116514764
NCBI info 116514764 Gene: - Synonym: LBUL_1821
SCL: @Secretory(released) (with CS) Length 85 COG -
Species: Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365 Location 1656193..1656450 Strand: -
Product: hypothetical protein
Sequence:
MKEKNWLTWLTVLALLVGFAAMGASVWLSAQAAKQTQRNSQLAGQLYQASRTKSQEASSIKKRLDKLASDNSSLKKKNSRLAKEN


This is a pseudogene


Protein clustering result of GI: 116514764
protein GI: 116514764 is in cluster LaCOG99139
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG99139 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG99139
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
104774633Lactobacillus_delbrueckii_bulgaricus_ATCC11842mMKEKNWLTWLTVLALVVGFAAMGASVWLSAQAAKQTQRNSQLAGQLYQASRTKSQEASS
116514764Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365-MKEKNWLTWLTVLALLVGFAAMGASVWLSAQAAKQTQRNSQLAGQLYQASRTKSQEASS
 
104774633Lactobacillus_delbrueckii_bulgaricus_ATCC11842IKKRLDKLASDNSSLKKKNSRLAKENqalkqanqdlpaasaaaglnvweteekggklqlk
116514764Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365IKKRLDKLASDNSSLKKKNSRLAKEN----------------------------------
 
104774633Lactobacillus_delbrueckii_bulgaricus_ATCC11842idnqtgqavsdllvlavaangril
116514764Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365------------------------
 
Copyright © 2010 Miaomiao Zhou
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