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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein


GI:116514215
NCBI info 116514215 Gene: - Synonym: LBUL_1146
SCL: @Intracellular Length 182 COG -
Species: Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365 Location 1052524..1053072 Strand: +
Product: hypothetical protein
Sequence:
MLGLIAVISSNNQTVSAVKYGRGKQIVVPKDLRGKWYSYDVGRDSNKHVIEFTKYTFSGSLGNNMLIYARNGYPSYHYYAYLKDLTKKQIAENRAIEKAS
KHWVAGYYSRIYKKRYFCVGYWYIAREHFPSFRRVNRHINGKKVGVLVYFNGYNWVIYYPTKALAKQYKRTSVPNYKGLSFK


This is a pseudogene


Protein clustering result of GI: 116514215
protein GI: 116514215 is in cluster LaCOG99095
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG99095 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG99095
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes
58337507Lactobacillus_acidophilus_NCFMmifmlrknilpltsmvLVsgLSgVAmHvEpVNAstYGnGavVtVPKkMQGtWYSYDrdah
116514215Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365----------------MLglIAvISsNnQtVSAvkYGrGkqIvVPKdLRGkWYSYDvgrd
 
58337507Lactobacillus_acidophilus_NCFMSgKkI------TFgahtvNgkVIYSQDkniisdYF-------ngKIqnqRkfDQvTKNWM
116514215Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365SnKhVieftkyTFsgslgNnmLIYARNgypsyhYYaylkdltkkQIaenRaiEKaSKHWV
 
58337507Lactobacillus_acidophilus_NCFMSGktTKMkddtFYeInpW-ItfEkWnlYRvapQtINGQKhnILVYtSrYDggnYYrSKkL
116514215Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365AGyySRIykkrYFcVgyWyIarEhFpsFRrvnRhINGKKvgVLVYfNgYNwviYYpTKaL
 
58337507Lactobacillus_acidophilus_NCFMAKQmKny---kFEkINYtm
116514215Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365AKQyKrtsvpnYKgLSFk-
 
Copyright © 2010 Miaomiao Zhou
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