LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Protein

GI:116511523
NCBI info	116511523	Gene:	-	Synonym:	LACR_0758
SCL:	@N-terminally anchored (No CS)	Length	182	COG	-
Species:	Lactococcus_lactis_cremoris_SK11	Location	703273..703821	Strand:	+
Product:	Diadenosine tetraphosphatase related serine/threonine protein phosphatase
Sequence:	MATLTRRFKKPIIIILSVLLLTVIIIFSVSIRNHFLNYNPPKTKRQIEQLVKASADNPKTRFVTDGQHYQRNLFVSDIHGRLPGLKKTLTEIHFSKSDRL FVLGDSIDHGRFGFDVLLYLLKTLPDAGYHVTVMMGNHEQMWSELASDGKTDAEQLSNAIGTIDIYEGAPPNGWQYSIENWK

This pseudogene can be concatenated as : 116511523_999990014

Concatenated Sequence:

MATLTRRFKKPIIIILSVLLLTVIIIFSVSIRNHFLNYNPPKTKRQIEQLVKASADNPKTRFVTDGQHYQRNLFVSDIHGRLPGLKKTLTEIHFSKSDRL
FVLGDSIDHGRFGFDVLLYLLKTLPDAGYHVTVMMGNHEQMWSELASDGKTDAEQLSNAIGTIDIYEGAPPNGWQYSIENWKxMNLSYEKEKKTDLFWEH
LPGDSFERRNSVAKAVGVPNTDVQVFVGHVSGILFGKHPNYICLDNTIVNGTLEQFEAVPVKIYCLEQEKFLG

Protein clustering result of GI: 116511523

protein GI: 116511523 is in cluster LaCOG02492
Species	GI	Gene	Synonym	NC	Product	Sub cellular Location	Length	In original LaCOG

Color Legend:

Corrected sequence

Pseudo gene

Protein Domain structure of LaCOG02492 (Scale up the web page to see more details)

View this figure in PNG format

Multiple Sequence alignment of LaCOG02492

Color Legend:

Corrected sequence

Pseudo gene

Gene made from mutiple pseudogenes


15672702	Lactococcus_lactis_lactis_IL1403	MATLispFKKlIflIsfViLLTgIffgfVSIqNcvLNYNPPKTKsQIEQLVKkSADssKT
116511523_999990014	Lactococcus_lactis_cremoris_SK11	MATLTRRFKKPIIIIlsVLLLTvIIIfsVSIRNHFLNYNPPKTKRQIEQLVKASADNPKT
125624633	Lactococcus_lactis_cremoris_MG1363	MATLTRRFKKPIIIIlsVLLLTvIIIlsVSIRNHFLNYNPPKTKRQIEQLVKASADNPKT

15672702	Lactococcus_lactis_lactis_IL1403	RFVsDdkHYQRNLFVSDIHGRLsGLKKTLTEIHFSKnDRLFVLGDSIDHGRFGFDVLLYL
116511523_999990014	Lactococcus_lactis_cremoris_SK11	RFVTDGQHYQRNLFVSDIHGRLPGLKKTLTEIHFSKSDRLFVLGDSIDHGRFGFDVLLYL
125624633	Lactococcus_lactis_cremoris_MG1363	RFVTDGQHYQRNLFVSDIHGRLPGLKKTLTEIHFSKSDRLFVLGDSIDHGRFGFDVLLYL

15672702	Lactococcus_lactis_lactis_IL1403	LKTLPDAGYHVTVMiGNHEQMWSELASDGKTDeEQLSNAIGTIDIYEGAPPNGWQYSIEN
116511523_999990014	Lactococcus_lactis_cremoris_SK11	LKTLPDAGYHVTVMMGNHEQMWSELASDGKTDAEQLSNAIGTIDIYEGAPPNGWQYSIEN
125624633	Lactococcus_lactis_cremoris_MG1363	LKTLPDAGYHVTVMMGNHEQMWSELASDGKTDAEQLSNAIGTIDIYEGAPPNGWQYSIEN

15672702	Lactococcus_lactis_lactis_IL1403	WKKLSVtDRQFLLTEMnNNFGQPEQLIEKIGNKWVVLSHSAKMsLSYEKEKtkDLFWEHL
116511523_999990014	Lactococcus_lactis_cremoris_SK11	WK---------------------------------------xMNLSYEKEKKTDLFWEHL
125624633	Lactococcus_lactis_cremoris_MG1363	WKKLSVaDRQFLLTEMkNNFGQPEQLIEKIGNKWVVLSHSAKMNLSYEKEKKTDLFWEHL

15672702	Lactococcus_lactis_lactis_IL1403	PGDSFERRNSVAKAVGVPNTDVQVFVGHVSGfLFGKHrNYICLDNTIVNGTLEQFEAVPV
116511523_999990014	Lactococcus_lactis_cremoris_SK11	PGDSFERRNSVAKAVGVPNTDVQVFVGHVSGILFGKHPNYICLDNTIVNGTLEQFEAVPV
125624633	Lactococcus_lactis_cremoris_MG1363	PGDSFERRNSVAKAVGVPNTDVQVFVGHVSGILFGKHPNYICLDNTIVNGTLEQFEAVPV

15672702	Lactococcus_lactis_lactis_IL1403	KIYCLEQEKFLG
116511523_999990014	Lactococcus_lactis_cremoris_SK11	KIYCLEQEKFLG
125624633	Lactococcus_lactis_cremoris_MG1363	KIYCLEQEKFLG