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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein


GI:116511102 is not in any secretome LaCOG
NCBI info 116511102 Gene: - Synonym: LACR_0285
SCL: @N-terminally anchored (No CS) Length 35 COG -
Species: Lactococcus_lactis_cremoris_SK11 Location 265280..265387 Strand: -
Product: hypothetical protein
Sequence:
MNKKIFVPMATIKLLSSAILFANSASADTNMNVQA


This pseudogene can be concatenated as : 116511102_116511101
Concatenated Sequence:
MNKKIFVPMATIKLLSSAILFANSASADTNMNVQAxDGIVSTDVNPLSTTSRGQVLIDGTGSNGLHLTSGNTVTTGQLDFTYSGSFPVGSIGWNQETEFV
LVLPSELDEAAQDPSFITYFSGTYDGPGWGANPYQYQTSDIRMGVDNDGNTIVRFTNPPATWGIANGLHFNVNIALDLGDFVTQTGIRIADAVNGTHYSF
NGAVVTDHDYTNIADDNTATSLNTHALDPGYDLLQQVPTIEDVYDTDTTISGTGVPGATIEIKAGGKVIGTGTVGTNGIYHVTISPKQNENVTIEVRQNT
GVGMSAAATTTVKHKVSEIPAPKVNTIHEGDTVVTGTGHTPGNTIITDSSGQEIGRGSVDSAGKYSITLTSSQPAYSILNVVETDGKDTSPITQVVVQAP
IPNAITHIDNFSASQDQYITGTYTGSKVAKIGLTVDNAKKPLIKITPGNGNFSIFTSTYGITASSTVLVTLYDANDVALTSGNSVSVLP


Copyright © 2010 Miaomiao Zhou
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