spacer
spacer

LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Logo
spacer
Menu
Home
Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
Show all LaCOGs
Search / Browse All
Domain Search
Blast your sequence
spacer
Protein

GI:116493957
NCBI info 116493957 Gene: - Synonym: LSEI_0393
SCL: @Intracellular Length 254 COG -
Species: Lactobacillus_casei_ATCC_334 Location 395375..396139 Strand: +
Product: Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Sequence: 
MAILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQLAAGRRMGMQVHGYHYAHYHNSADAVAEGRFFGTTAKALGLSTESVMAADVE
DPGLSGELTGLTNVFLQTVKAIGYPHTDLYTMASWLTTRRFDRVALIPKNLWLASYGVNQPGVDNVGTWQFTNNFQGLGVDMSYDFFGHYTTRLTGTLND
GVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKTILSVIHPGDQLRVN


This pseudogene can be concatenated as : 116493956_116493957
Concatenated Sequence: 
MDKELLTYVLDQAVGVVIAVFLLTRIERRLDVLITSIEKFMTKLDAKDRLxMAILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQL
AAGRRMGMQVHGYHYAHYHNSADAVAEGRFFGTTAKALGLSTESVMAADVEDPGLSGELTGLTNVFLQTVKAIGYPHTDLYTMASWLTTRRFDRVALIPK
NLWLASYGVNQPGVDNVGTWQFTNNFQGLGVDMSYDFFGHYTTRLTGTLNDGVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKTILSVIHPGD
QLRVN


Protein clustering result of GI: 116493957
protein GI: 116493957 is in cluster LaCOG01653
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG01653 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG01653
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


28379506Lactobacillus_plantarum_WCFS1mnfKsqnpIdasQserfKLykSGkLwlvAgltffsflggsvlndtnvhadatnatttsss


116493807Lactobacillus_casei_ATCC_334----------mKlskhfKLimtGAfslASIglfapI------------------------


191637059Lactobacillus_casei_BL23----------mKlskhfKLimtGAfslASVglfapI------------------------


116618722Leuconostoc_mesenteroides_ATCC_8293----------mnKlkrwvVAsiGAVa------ffga------------------------


42518242Lactobacillus_johnsonii_NCC_533-------mrstnKKfIsaLAcAsAMtalAIvdpmgV------------------------


116628838Lactobacillus_gasseri_ATCC_33323-meEkflmrstnKRfIsaLAcAsAMtalAIadpmgV------------------------


104773285Lactobacillus_delbrueckii_bulgaricus_ATCC11842----------mKfKrLklLAlvstLtaAvsmsfagL------------------------


116513255Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365----------mKfKrLklLAlvstLtaAvsmsfagL------------------------


58337426Lactobacillus_acidophilus_NCFM---------MfKKKtIiKLActtmLlnSgIalmprV------------------------


58337625_58337624Lactobacillus_acidophilus_NCFM--------MtttKKlViKLAcAtALgtAgValtqvn------------------------


161507753Lactobacillus_helveticus_DPC_4571--------MtttKKiImKLAcAtALgtAgValtqvn------------------------


58338161Lactobacillus_acidophilus_NCFM--------MslKKRfItKLAfvtmLsvAgVsaataV------------------------


161508181Lactobacillus_helveticus_DPC_4571--------MLfKKRfItKLAyvaifsttgIaavkaq------------------------


999990013_184154962Lactobacillus_fermentum_IFO_3956--------MkvandiIewLiqSGAIvw-----lfyf------------------------


116493956_116493957Lactobacillus_casei_ATCC_334----------mdKElLtyVldqavgvviAVflltrI------------------------


191637278_191637279Lactobacillus_casei_BL23----------mdKElLtyVldqavgvviAVflltrI------------------------


116492575Pediococcus_pentosaceus_ATCC_25745---------MtKlnkLkwVvaiamaffigVntaplV------------------------


191638122Lactobacillus_casei_BL23---------MklKtkLitLvvAflaai-----sfaL------------------------


116494151Lactobacillus_casei_ATCC_334------------------------------------------------------------


191637477Lactobacillus_casei_BL23------------------------------------------------------------


90961285Lactobacillus_salivarius_UCC118---------MkKKKiLitLAtcaALl------fsvq------------------------


90961782Lactobacillus_salivarius_UCC118---------MkKKKiLitLAtcaAL-------ffsV------------------------


116495375Lactobacillus_casei_ATCC_334---------MklKtkLitLvvAflaai-----sfaL------------------------


116512455Lactococcus_lactis_cremoris_SK11------------mKkViKkAaiGmVa------ffvV------------------------


116511893Lactococcus_lactis_cremoris_SK11------------mKrLiKkAaiGmVa------ffvV------------------------


125623696Lactococcus_lactis_cremoris_MG1363------------mKkViKkAaiGmVa------ffvV------------------------


29376513Enterococcus_faecalis_V583---------------MkKkllAtlLvv-----lffV------------------------


29374994Enterococcus_faecalis_V583---------------MkKkilAGALva-----lffM------------------------


29377273Enterococcus_faecalis_V583---------------MkKkilvGALva-----lffM------------------------


116492748Pediococcus_pentosaceus_ATCC_25745---------MiEhKlkalIlmvGAIfm-----aflM------------------------


28377553Lactobacillus_plantarum_WCFS1----------mKQplkhKIiltGAamm-----aaff------------------------


28378966Lactobacillus_plantarum_WCFS1------------mKfknKLAltGAatm-----aalf------------------------


116618508Leuconostoc_mesenteroides_ATCC_8293---------MnKitfwssIAavsiaaslvavgqaha------------------------


29376682Enterococcus_faecalis_V583----------------mKkiiSGmLictvllnsfsV------------------------


81429400Lactobacillus_sakei_23K----myaanqtgssgavthtiinennnhAlgdlikq------------------------


 


28379506Lactobacillus_plantarum_WCFS1aastassasvatssaasdettkatsVsssAatqvtsaatTktTsqaAtAsssaatSqsTS


116493807Lactobacillus_casei_ATCC_334-------------------------VlgqgQrvyAGTpsTvsTVvNgSdeQdfhlTNQhS


191637059Lactobacillus_casei_BL23-------------------------VlgqgQrvyAGTssTvsTVvNgSdeQdfhlTNQhS


116618722Leuconostoc_mesenteroides_ATCC_8293------------------------------------------------------------


42518242Lactobacillus_johnsonii_NCC_533------------------------------------------------------------


116628838Lactobacillus_gasseri_ATCC_33323------------------------------------------------------------


104773285Lactobacillus_delbrueckii_bulgaricus_ATCC11842------------------------------------------------------------


116513255Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365------------------------------------------------------------


58337426Lactobacillus_acidophilus_NCFM------------------------------------------------------------


58337625_58337624Lactobacillus_acidophilus_NCFM------------------------------------------------------------


161507753Lactobacillus_helveticus_DPC_4571------------------------------------------------------------


58338161Lactobacillus_acidophilus_NCFM------------------------------------------------------------


161508181Lactobacillus_helveticus_DPC_4571------------------------------------------------------------


999990013_184154962Lactobacillus_fermentum_IFO_3956-------------------------gfviAKpwvgskiehakTVrqreAwtlleqvamTa


116493956_116493957Lactobacillus_casei_ATCC_334------------------------------------------------------------


191637278_191637279Lactobacillus_casei_BL23------------------------------------------------------------


116492575Pediococcus_pentosaceus_ATCC_25745-----------------------------------------------SAnagsstnNQyt


191638122Lactobacillus_casei_BL23------------------------------------------------------------


116494151Lactobacillus_casei_ATCC_334------------------------------------------------------------


191637477Lactobacillus_casei_BL23------------------------------------------------------------


90961285Lactobacillus_salivarius_UCC118------------------------------------------------------------


90961782Lactobacillus_salivarius_UCC118------------------------------------------------------------


116495375Lactobacillus_casei_ATCC_334------------------------------------------------------------


116512455Lactococcus_lactis_cremoris_SK11------------------------------------------------------------


116511893Lactococcus_lactis_cremoris_SK11------------------------------------------------------------


125623696Lactococcus_lactis_cremoris_MG1363------------------------------------------------------------


29376513Enterococcus_faecalis_V583------------------------------------------------------------


29374994Enterococcus_faecalis_V583------------------------------------------------------------


29377273Enterococcus_faecalis_V583------------------------------------------------------------


116492748Pediococcus_pentosaceus_ATCC_25745------------------------------------------------------------


28377553Lactobacillus_plantarum_WCFS1------------------------------------------------------------


28378966Lactobacillus_plantarum_WCFS1------------------------------------------------------------


116618508Leuconostoc_mesenteroides_ATCC_8293------------------------------------------------------------


29376682Enterococcus_faecalis_V583-------------------------IasgeElvkteTtgetglVtqAtSetttnsTedTS


81429400Lactobacillus_sakei_23K------------------------------------------------------------


 


28379506Lactobacillus_plantarum_WCFS1tassstsqatktassAAtstSatatsqaTsvasStaTtTqVshtAsstaasAasstaTvK


116493807Lactobacillus_casei_ATCC_334NlDtDNHvlgggqagpAlr-----------------------------------------


191637059Lactobacillus_casei_BL23NlDtDNHvlgggqaapAlr-----------------------------------------


116618722Leuconostoc_mesenteroides_ATCC_8293---------mitgVsAntn-----------------------------------------


42518242Lactobacillus_johnsonii_NCC_533--------tkthqVaqAat-----------------------------------------


116628838Lactobacillus_gasseri_ATCC_33323--------tkthqVvqAat-----------------------------------------


104773285Lactobacillus_delbrueckii_bulgaricus_ATCC11842--------tqasttsAssr-----------------------------------------


116513255Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365--------tqasttsAssr-----------------------------------------


58337426Lactobacillus_acidophilus_NCFM--------istsqtvqAss-----------------------------------------


58337625_58337624Lactobacillus_acidophilus_NCFM--------mpqvtVkAAtt-----------------------------------------


161507753Lactobacillus_helveticus_DPC_4571--------rpqi-tvnAat-----------------------------------------


58338161Lactobacillus_acidophilus_NCFM--------qphtntvhAst-----------------------------------------


161508181Lactobacillus_helveticus_DPC_4571--------apqt--vqAst-----------------------------------------


999990013_184154962Lactobacillus_fermentum_IFO_3956vnslvssskpgpqkfAeasdqvqSymadhgvhidmkTvqSVvqAAyEqSpltpttepTkK


116493956_116493957Lactobacillus_casei_ATCC_334--------errldVlitsi-----------------------------------------


191637278_191637279Lactobacillus_casei_BL23--------errldVlitsi-----------------------------------------


116492575Pediococcus_pentosaceus_ATCC_25745NtqhEatqkhsttdkAktg-----------------------------------------


191638122Lactobacillus_casei_BL23----------psqVnAAkg-----------------------------------------


116494151Lactobacillus_casei_ATCC_334------------------------------------------------------------


191637477Lactobacillus_casei_BL23------------------------------------------------------------


90961285Lactobacillus_salivarius_UCC118--------lntpsVqAArg-----------------------------------------


90961782Lactobacillus_salivarius_UCC118-------qlntpsVqAArg-----------------------------------------


116495375Lactobacillus_casei_ATCC_334----------psqVnAAkg-----------------------------------------


116512455Lactococcus_lactis_cremoris_SK11--------assgpVfAAvg-----------------------------------------


116511893Lactococcus_lactis_cremoris_SK11--------aasgpVfAAvg-----------------------------------------


125623696Lactococcus_lactis_cremoris_MG1363--------aasgpVfAAvg-----------------------------------------


29376513Enterococcus_faecalis_V583---------spistfAAkg-----------------------------------------


29374994Enterococcus_faecalis_V583----------ptaMfAAkg-----------------------------------------


29377273Enterococcus_faecalis_V583----------plnVfAAkg-----------------------------------------


116492748Pediococcus_pentosaceus_ATCC_25745--------gnttshaArmd-----------------------------------------


28377553Lactobacillus_plantarum_WCFS1--------lgvnanaArmd-----------------------------------------


28378966Lactobacillus_plantarum_WCFS1--------lglnasaArmd-----------------------------------------


116618508Leuconostoc_mesenteroides_ATCC_8293---------adgvpaitag-----------------------------------------


29376682Enterococcus_faecalis_V583SvteENtserdsstsStkeeSldSstnsTteehSsvseTNttdSktEaSqsSevekkTid


81429400Lactobacillus_sakei_23K--------ngpasfadesg-----------------------------------------


 


28379506Lactobacillus_plantarum_WCFS1avKAasstvssaaTTatKatakvaavaytaattsstdvwtiGDttrpRvdvVDVaSYQst


116493807Lactobacillus_casei_ATCC_334--------------TKRsiMsnglqAnsiQTysQtVmsftiGDsrvpRvdtVDVaSYQng


191637059Lactobacillus_casei_BL23--------------TKRsiMsnglqAnsiQTysQtVmsftiGDsrvpRvdtVDVaSYQng


116618722Leuconostoc_mesenteroides_ATCC_8293--------------------------------------------------GIDVaSYQGd


42518242Lactobacillus_johnsonii_NCC_533------------------------------------------DtvpAkstGVDVSSwQGt


116628838Lactobacillus_gasseri_ATCC_33323------------------------------------------DnvpARsaGVDVaSwQGt


104773285Lactobacillus_delbrueckii_bulgaricus_ATCC11842------------------------------------------------syGVDVSSYQpt


116513255Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365------------------------------------------------syGVDVSSYQpt


58337426Lactobacillus_acidophilus_NCFM------------------------------------------tsvaAkvlGIDVaSYQsa


58337625_58337624Lactobacillus_acidophilus_NCFM-------------------------------------------svvARalGVDVaSYQsa


161507753Lactobacillus_helveticus_DPC_4571------------------------------------------tsvaARalGVDVaSYQsa


58338161Lactobacillus_acidophilus_NCFM------------------------------------------tsvaARslGVDVaSYQna


161508181Lactobacillus_helveticus_DPC_4571------------------------------------------tsvaARslGIDVaSYQsa


999990013_184154962Lactobacillus_fermentum_IFO_3956pdKlgqKEpdlvpdgKaKaIdpkevAxmsQTarQrqliprrshKmavRnpfIDVSSYQpd


116493956_116493957Lactobacillus_casei_ATCC_334--------------------------------EkfMtkldakDRlxmailmaDVSSwQpe


191637278_191637279Lactobacillus_casei_BL23--------------------------------EkfMtkld----akdklxmaDVSSwQpe


116492575Pediococcus_pentosaceus_ATCC_25745------------------------------------nkdarksvtsvRsqGVDwakYQGy


191638122Lactobacillus_casei_BL23------------------------------------------DQ------GpDwakYQGa


116494151Lactobacillus_casei_ATCC_334------------------------------------------------------------


191637477Lactobacillus_casei_BL23------------------------------------------------------------


90961285Lactobacillus_salivarius_UCC118------------------------------------------eh------GVDaavFQGa


90961782Lactobacillus_salivarius_UCC118------------------------------------------Dh------GVDaavFQGa


116495375Lactobacillus_casei_ATCC_334------------------------------------------DQ------GVDwSrYQGd


116512455Lactococcus_lactis_cremoris_SK11------------------------------------------DQ------GVDwSkYnGd


116511893Lactococcus_lactis_cremoris_SK11------------------------------------------DQ------GVDwSkYnGt


125623696Lactococcus_lactis_cremoris_MG1363------------------------------------------DQ------GVDwSkYnGd


29376513Enterococcus_faecalis_V583------------------------------------------DQ------GVDlSiwnGy


29374994Enterococcus_faecalis_V583------------------------------------------DQ------GVDwaiYQGe


29377273Enterococcus_faecalis_V583------------------------------------------DQ------GVDwaiYQGe


116492748Pediococcus_pentosaceus_ATCC_25745--------------------------------------------------mVDVSNnnGy


28377553Lactobacillus_plantarum_WCFS1--------------------------------------------------mVDVSNnnGy


28378966Lactobacillus_plantarum_WCFS1--------------------------------------------------mVDVSNnnGy


116618508Leuconostoc_mesenteroides_ATCC_8293------------------------------------------tsglpRmdvVDVSSnnGt


29376682Enterococcus_faecalis_V583qdeAdyQEaaregTnhKKgtyamknglssrvaratVanvyanDpnlpgknfIDVSSwnGd


81429400Lactobacillus_sakei_23K--------------------------------------isaaetgrpakdfIDISSnnGs


 


28379506Lactobacillus_plantarum_WCFS1mtqs--dfnKLka-aGVKtViVKst-EGT----dYtNPaAlNQakmAnkAGLnvdfYHyA


116493807Lactobacillus_casei_ATCC_334mtqa--nYnsLra-sGVKaViVKsS-EGs----tYRNPyAakQlAqAkAAGLKtavYHyv


191637059Lactobacillus_casei_BL23mtqa--nYnsLrt-sGVKaViVKsS-EGs----tYRNPyAakQlAqAkAAGLKtavYHyv


116618722Leuconostoc_mesenteroides_ATCC_8293tanyfnsfkqvgDnFtMvklggRgggEGa----hYsNPkAyAQIhnAdAvGMQtgGYfWA


42518242Lactobacillus_johnsonii_NCC_533kldq-------qaKsGaqfavVKvS-EGT----nYQNPnAqgQIqSAeqnnMmtmGYHyt


116628838Lactobacillus_gasseri_ATCC_33323nltq-------qaKsGaKftvVKvS-EsT----nYQNPhAqgQInSAeqnnMmpmGYHyA


104773285Lactobacillus_delbrueckii_bulgaricus_ATCC11842stte-------YsKaGaqfViVKvS-EGT----sYRNPnAkAQVASAkAnkLlpmaYHfA


116513255Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365stte-------YsKaGaqfViVKvS-EGT----sYRNPnAkAQVASAkAnkLlpmaYHfA


58337426Lactobacillus_acidophilus_NCFMdlta-------HaKaGsqfaiVKvS-EGT----sYRNPkgaSQIkSAiAndMmpmGYHfA


58337625_58337624Lactobacillus_acidophilus_NCFMdlss-------HaqaGsqfaiVKvS-EGT----sYRNPkAsSQIstAlsnnMmpmaYHfA


161507753Lactobacillus_helveticus_DPC_4571dlss-------HaqaGsqfaiVKvS-EGT----tYRNPkAsSQIstAisnnMmpmaYHfA


58338161Lactobacillus_acidophilus_NCFMdlsp-------HassGaKfaiVKvS-EGT----nYRNPkAsgQVASArsqnMmpmGYHfA


161508181Lactobacillus_helveticus_DPC_4571dlsa-------HarsGaKfavVKvS-EGT----sYRNPkAsgQIASArsqnMmpmGYHfA


999990013_184154962Lactobacillus_fermentum_IFO_3956tvaf--fqt--aknqGaqgVvVKlt-EGsedgsnYiNPrAaAQIhnAlAvGLRvacYHfA


116493956_116493957Lactobacillus_casei_ATCC_334sdsw---frKLaD-vGVKaVvVKlt-EGT----tYRNPkAaAQlAagrrmGMQvHGYHyA


191637278_191637279Lactobacillus_casei_BL23ldsw---frKLaD-vGVKaVvVKlt-EGT----tYRNPkAaAQlAagrrmGMQvHGYHyA


116492575Pediococcus_pentosaceus_ATCC_25745ngvk--GYk--NDqFaIaqIggsy--gGT----finqatynSQVASAlnqGMRAHtYiW-


191638122Lactobacillus_casei_BL23sgry--Gtd--qDKFvIaqIggty--gGT----yidqwtydSQIASAkAAGkRvHsYiW-


116494151Lactobacillus_casei_ATCC_334------------------------m-sG---------PltflpIASAkAArkRvHsYiW-


191637477Lactobacillus_casei_BL23------------------------------------------------------------


90961285Lactobacillus_salivarius_UCC118sgkw--GYa--rDKFmIsqIggttt-gwn----lYdqwtypTQVsStiAqGkRAHtYiW-


90961782Lactobacillus_salivarius_UCC118sgkw--GYa--rDKFmIsqIggttt-gwn----lYdqwtypTQVsStiAqGkRAHtYiW-


116495375Lactobacillus_casei_ATCC_334ngvf--GYs--tDKFGIsqIggysg-yG-----tYeqttykTQVASliAAGkRAHtYiW-


116512455Lactococcus_lactis_cremoris_SK11ygnf--GYg--HDKFaLsqVggty--gGl----fvdqapysTQVASAiAqGkRAHtYiW-


116511893Lactococcus_lactis_cremoris_SK11ygnf--GYa--HDKFafsqIggty--gGT----fvdqatyeTQVASviAqGkRAHtYiW-


125623696Lactococcus_lactis_cremoris_MG1363ygnf--GYa--HDKFafsqIggty--gGT----fvdqatyeTQVASAiAqGkRAHtYiW-


29376513Enterococcus_faecalis_V583qatf--GYa--HDKFsIsqIggqnn-yG-----iYdqvtysSQVAStiAqGkRAHtYvW-


29374994Enterococcus_faecalis_V583qgrf--GYa--HDKFaIaqIggyna-sG-----iYeqytykTQVASAiAqGkRAHtYiW-


29377273Enterococcus_faecalis_V583qgrf--GYa--HDKFaIaqIggyna-sG-----iYeqytykTQVASAiAqGkRAHtYiW-


116492748Pediococcus_pentosaceus_ATCC_25745msta--eYvsmrNeFGVKaVtVKiS-EGg----tYKdPyAaSnIAnvqAAGMyiNGYHfA


28377553Lactobacillus_plantarum_WCFS1msta--eYvsmrNeFGVRaltVKiS-EGT----tfKdgyAaSnIAngqAAGLyvNsYHfA


28378966Lactobacillus_plantarum_WCFS1msta--eYvsmrNeFGVKaVtVKiS-EGg----tYKdPyAaSnIAnvqAAGMyiNGYHfA


116618508Leuconostoc_mesenteroides_ATCC_8293isva--dYkKmqN-YGVKaViVKlS-Ead----sYKNPyAkSQItnAkeAGLQvgaYHys


29376682Enterococcus_faecalis_V583isva--eYqKiks-YGVtgVsVKlt-EGT----wYvNPyAagQIrnAkAAGLKvsaYHys


81429400Lactobacillus_sakei_23Kiskd--efqlmkNqYGIKgViVKlt-EGd----sYcNPlApeQIAnAqAAGLKvsvYHfs


 


28379506Lactobacillus_plantarum_WCFS1tfs-tadAAksEAtnmagFlvkn--nvstkvLlfaDmED</