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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein

GI:116491491
NCBI info 116491491 Gene: - Synonym: OEOE_1511
SCL: @N-terminally anchored (No CS) Length 379 COG -
Species: Oenococcus_oeni_PSU-1 Location 1431758..1432897 Strand: -
Product: hypothetical protein,cscC, pseudogene, C-term truncated
Sequence: 
MKTNKKIILISIAFVVFIFLLALNLLNYKKHLNSFGDNVSTQKKQKNNQTNIDEQSGSSFSSASSSSDKTSVTTSTDRWDNLFRSFNSKGILGKAASFNI
FANQIETFNSLEGSFAAEKLTISQSWEKIGNDYTSYLQSQISAQDNKLTLSKSIKKIVFGNDFKLNSQSLNLINQSKTIGLLNYKDNFFYQDKNNSLINF
ANEFKRLNNNSAEIADYSMSLKNKLSVTKSESGEVSIDASKVPLIYKDVKYIYLQANQLPGAGKKIIFSKGFSSAKKIIISVDTSHLKQLSLNWINFADD
KGNVISNKNILFSFYNSNKSVFSGAINVRFHNSGINAILAPSATVTSFYSSFQGTIVANKVISENDTKQESSFPDIEKR


This is a pseudogene


Protein clustering result of GI: 116491491
protein GI: 116491491 is in cluster LaCOG03173
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG03173 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG03173
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


116491491Oenococcus_oeni_PSU-1MktnkkIiLIsIafVvfIfllaLNllnykkhlnsfgdnvsTqKKqknNqTnidEQsgSSF


116618514Leuconostoc_mesenteroides_ATCC_8293MlkkalLpLLgMltVaiVsawyINf---------------SpQRtsvStTyqyKKpsSTY


 


116491491Oenococcus_oeni_PSU-1ssassSsDkTsVT-tStdrWdNlFrsfnSkgILGkAasFNIFAnqIEtfN-sLEGSFAaE


116618514Leuconostoc_mesenteroides_ATCC_8293qfqrlAeDnTrVTlpAaghWqDdFseltNt-VLGlSgqFNIFSktMDldDrpIEGNFAtQ


 


116491491Oenococcus_oeni_PSU-1kLtIsQswekiGNdytSYLQsqIsAqDNKlTlSksikkIVfGNdFKlnsQslnlinQSkt


116618514Leuconostoc_mesenteroides_ATCC_8293dM-IrKggssaGHkgiSYLQrsIqSnNDQaTfNn--dtLIlGSsFKy-lQptatdgRSti


 


116491491Oenococcus_oeni_PSU-1iGL-LNykdnffyQD-kNNslINfanEfkRLNNnSaeIADYSmSlkNklSVtksesGeVS


116618514Leuconostoc_mesenteroides_ATCC_8293nGLkLNqtpkvlrQDadNDeyLDidtElaRLSSvSkiIANHSkN--NnaTVenkwgGtIT


 


116491491Oenococcus_oeni_PSU-1IDASkVPliykDVKYIyLQANqlPGagkkIifsKGfSsaKKIIISVDTShLkqlSlnwIn


116618514Leuconostoc_mesenteroides_ATCC_8293IDAShIP-sedNVKYLtVKASdfPGyslsI---KGiSdvEKVVITIDTSgVnnfStgsMa


 


116491491Oenococcus_oeni_PSU-1FaddkgNVisNKNILFSFYN-sNKSvFSGaINvRfHNsgi-NAILAPsatVT-SfysSFq


116618514Leuconostoc_mesenteroides_ATCC_8293F----dSVskSKNIMFNFYNidSETnYTGkVDwQsNNketsNAILSPegiVTlSgigTFn


 


116491491Oenococcus_oeni_PSU-1GtIVANKvIseNdtkqeSSFPDIEkr----------------------------------


116618514Leuconostoc_mesenteroides_ATCC_8293GnIVAHKyVgnNtfptsSTFPDLElpidrnndvspklisapdvdfgshkinsetslignw


 


116491491Oenococcus_oeni_PSU-1------------------------------------------------------------


116618514Leuconostoc_mesenteroides_ATCC_8293kgncqvsgekskeikinvelakqftsengsfandvswqlvksdyssgslttslqdfttts


 


116491491Oenococcus_oeni_PSU-1------------------------------------------------------------


116618514Leuconostoc_mesenteroides_ATCC_8293arinywpwqddgtgnllsdwsynkekkqysfydmqvsnldtiteignytatlrwtlvdsp






 



            
            
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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