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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Method
Summary of results
Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein

GI:116491077
NCBI info 116491077 Gene: - Synonym: OEOE_1054
SCL: @N-terminally anchored (No CS) Length 163 COG -
Species: Oenococcus_oeni_PSU-1 Location 983777..984268 Strand: -
Product: ABC-type metal ion transport system, periplasmic component/surface antigen
Sequence: 
MKRNKNIKRISWITGIIVIIIVAIFGIHYLSSKHQTAVEKSSTITVGSQGSDYAIWQHIAKSNDAKKLGLKIKVKQITDGVQLNKATAQGSIDVNAFQSW
SYYLAYNQENKKNKLAALGTTYLEPMGIYSDKYKKISEIPDGATIAIANNPSQATVTLTTMKK


This is a pseudogene


Protein clustering result of GI: 116491077
protein GI: 116491077 is in cluster LaCOG01803
Species GI Gene Synonym NC Product Sub cellular Location Length In original LaCOG
Color Legend:Corrected sequence Pseudo gene


Protein Domain structure of LaCOG01803 (Scale up the web page to see more details)
View this figure in PNG format




Multiple Sequence alignment of LaCOG01803
Color Legend: Corrected sequence Pseudo gene Gene made from mutiple pseudogenes 


116493975Lactobacillus_casei_ATCC_334--msrwkKaI-ftgIalVslltLtAcGkaaSSNsshtgSKSesIiiGSsGsDyQiWQHIA


191637304Lactobacillus_casei_BL23--msrwkKaI-ftgIalVslltLtAcGkaaSSNsshtsSKSesIiiGSsGsDyQiWQHIA


116491077Oenococcus_oeni_PSU-1MKRnKniKrIsWitgIiVIIIVaifgihyLSSkhQtAveKSSTITVGSqGsDyaiWQHIA


116617271Leuconostoc_mesenteroides_ATCC_8293--mvKKktvV-iAAVVagIVIVagviihrnTaqt----tdkTevTVGSIGsDaQiWeyIA


104773327Lactobacillus_delbrueckii_bulgaricus_ATCC11842MRRkKKHQrL-iAAtIaLIVIIaAffalrLTSsrQtAkSqTTTvTVGSIGPDVQVWQHIA


116513304Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365MRRkKKHQrL-iAAtIaLIVIIaAffalrLTSsrQtAkSqTTTvTVGSIGPDVQVWQHIA


148544793Lactobacillus_reuteri_F275_JGIMmRkKKHtgw-W--IVgIVVVILvAaGlsVgaNggf--tRNdeITVGtIGPDVQVWQHIA


184154140Lactobacillus_reuteri_F275_KitasatoMmRkKKHtgw-W--IVgIVVVILvAaGlsVgaNggf--tRNdeITVGtIGPDVQVWQHIA


184154653Lactobacillus_fermentum_IFO_3956MRKyrw-----W--LVaILIIILAAfGlhLAtssK---vsqhTvTVGaIGPDVQVWQHIA


 


116493975Lactobacillus_casei_ATCC_334KSpQAKKaGLrIKVKQvsDGnvtNsATAeGQlDVNAFQSyAYfQqYNK-lNpsekLAALG


191637304Lactobacillus_casei_BL23KSpQAKKaGLrIKVKQvsDGnvtNsATAeGQlDVNAFQSyAYfQqYNK-lNpsekLAALG


116491077Oenococcus_oeni_PSU-1KSndAKKlGLKIKVKQiTDGvqLNKATAqGsIDVNAFQSWsYylAYNq-eNKKnkLAALG


116617271Leuconostoc_mesenteroides_ATCC_8293KlpetKKenitIKVKnFTDGvsLNaATAqGkVDVNAFQSyAYfvAYNK-nNssnkLsvLG


104773327Lactobacillus_delbrueckii_bulgaricus_ATCC11842KSsQAKKlGLKIKVKaFTDGpsIlRATsdGsInVsAFaSWAYLEAYNKSksntgQqvALa


116513304Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365KSsQAKKlGLKIKVKaFTDGpsIlRATsdGsInVsAFaSWAYLEAYNKSksntgQqvALa


148544793Lactobacillus_reuteri_F275_JGInSKQAKseGLKIKVKsFTDpvaLNRATASGEIDVNAFQSWsYLQAYNK-eNRKaQLAAmG


184154140Lactobacillus_reuteri_F275_KitasatonSKQAKseGLKIKVKsFTDpvaLNRATASGEIDVNAFQSWsYLQAYNK-eNRKaQLAAmG


184154653Lactobacillus_fermentum_IFO_3956KSKaAKKaGiKInVKsFTDpigLNKATASGEIDVNAFQSWsYLEtYNK-qNKKaQLAALG


 


116493975Lactobacillus_casei_ATCC_334TTYLEPMGlYSkKYKqLreIPDGATIgIsNdPANatRGLLLLatAkLVTLKsdFnALSt-


191637304Lactobacillus_casei_BL23TTYLEPMGlYSkKYKqLreIPDGATIgIsNdPANatRGLLLLatAkLVTLKsdFnALSt-


116491077Oenococcus_oeni_PSU-1TTYLEPMGIYSDKYKKiSeIPDGATIAIANNPsqa--------tvtLtTmKK--------


116617271Leuconostoc_mesenteroides_ATCC_8293TTYLEPMGIYSEKYdsidDIPDGsTIAIANNaANTARGLkLLakAGLITLKdnFGsLSG-


104773327Lactobacillus_delbrueckii_bulgaricus_ATCC11842TTYLEPMGIYSsKYKKLSDlPkGATIAlANNaANeARGLLLLQSAGLIkLKKnFdsaSGN


116513304Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365TTYLEPMGIYSsKYKKLSDlPkGATIAlANNaANeARGLLLLQSAGLIkLKKnFdsaSGN


148544793Lactobacillus_reuteri_F275_JGITTYLEPMGlYSDKYKsvkDIPDGATvAIANNPANTARGLLLLQSAGLIkLKpGFGAtSG-


184154140Lactobacillus_reuteri_F275_KitasatoTTYLEPMGlYSDKYKsvkDIPDGATvAIANNPANTARGLLLLQSAGLIkLKpGFGAtSG-


184154653Lactobacillus_fermentum_IFO_3956TTYLEPMGIYSkrYKKvSDlPnGATIAIANNPANTARGLLLLQSAGLITLKKGFGvtSG-


 


116493975Lactobacillus_casei_ATCC_334vkDIqANPKHlKFKEvD----PsVqMLpdlDAeLIsNTrALdGgLNVLKDSLvHEKlNQt


191637304Lactobacillus_casei_BL23vkDIqANPKHlKFKEvD----PsVqMLpdlDAeLIsNTrALdGgLNVLKDSfvHEKlNQt


116491077Oenococcus_oeni_PSU-1------------------------------------------------------------


116617271Leuconostoc_mesenteroides_ATCC_8293vNDIknNPhnFKFKEIDDTTGPRVikdnSIaAaLIGNTIALeGkLNVLKDSLYyEKINQS


104773327Lactobacillus_delbrueckii_bulgaricus_ATCC11842TNDIvsNtKkFKFKlIDDTTGPRi--IKSVDAVLIGNTIALaGNLNVLKDSLYHEKINQS


116513304Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365TNDIvsNtKkFKFKlIDDTTGPRi--IKSVDAVLIGNTIALaGNLNVLKDSLYHEKINQS


148544793Lactobacillus_reuteri_F275_JGITNeIaANPKnlqFKEIDDTTGPRV--LKStDlVLIGNTIALTGHLNVLKDSiYHEKVdQS


184154140Lactobacillus_reuteri_F275_KitasatoTNeIaANPKnlqFKEIDDTTGPRV--LKStDlVLIGNTIALTGHLNVLKDSiYHEKVdQS


184154653Lactobacillus_fermentum_IFO_3956TNeIasNPrHFKFeEIDDTTGPRV--LnSVDAVLIGNTIALTGHLNVLtDSiYHEKIdQt


 


116493975Lactobacillus_casei_ATCC_334TraNvNILvTAvKNekkeEfKKLVpLYHdptIQsWIkKtfSGTKldVNKPiSYLQqK


191637304Lactobacillus_casei_BL23TraNvNILvTAvKNekkeEfKKLVpLYHdptIQsWIkKtfSGTKldVNKPiSYLQqK


116491077Oenococcus_oeni_PSU-1---------------------------------------------------------


116617271Leuconostoc_mesenteroides_ATCC_8293TKDNINILATAeKNKNNAKfKKLVKLYHsKaaQKyInKKfdGTKIEVqKsvSYLaD-


104773327Lactobacillus_delbrueckii_bulgaricus_ATCC11842TKNNINvLATAKKNKNNAaYKKLgKLYHNKQIQKWIAKKYSGTKVEVNKPvSYLtD-


116513304Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365TKNNINvLATAKKNKNNAaYKKLgKLYHNKQIQKWIAKKYSGTKVEVNKPvSYLtD-


148544793Lactobacillus_reuteri_F275_JGITKDNINvLATAKKNRdNkEYKKLVKLYHNKQIQqWIAKKYqGTKVnVdKPLnYLEn-


184154140Lactobacillus_reuteri_F275_KitasatoTKDNINvLATAKKNRdNkEYKKLVKLYHNKQIQqWIAKKYqGTKVnVdKPLnYLEn-


184154653Lactobacillus_fermentum_IFO_3956TKNNINILATAKKNahNqtYlKLVKLYHNqQIQeWIkKKYqGTKVEVNKPLSYLEk-






 



            
            
							 
				
 
				
 
						 
			
 
			
 
		
 
		
 
				 
	
 
	
 
	
 
	
 
		
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