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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Pseudogenes
Ubiquitous LaCOGs
Niche specific LaCOGs
Species specific LaCOGs
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Protein


GI:116334815 is not in any secretome LaCOG
NCBI info 116334815 Gene: - Synonym: LVIS_2263
SCL: @Intracellular Length 141 COG -
Species: Lactobacillus_brevis_ATCC_367 Location 2232626..2233051 Strand: -
Product: hypothetical protein
Sequence:
MATQRPAYVHVDQDNFTQYFDLNGSATYDKPTGIVTVTPDKNDQVGNFALKPKIDASTNFTLLGQVNLGNRTSATGGADGIGFAFHNGNSTDIGNAGDNL
GIGGLIDALGLKLDTWHNGAHMPEALRSGAQVSTTDANGYG


This pseudogene can be concatenated as : 116334816_116334815_116334814
Concatenated Sequence:
MERGWKRHQRLWLFSGVLVFGVGLTVLPAAADGVDTAPPATTADAVSTPISHATNSDVTTDQSVTVADSVTHHVSTTGAAVAPTNAAANDVTSRPTATVT
GSDSTTVPVNKSPTTSTAPLAQxMATQRPAYVHVDQDNFTQYFDLNGSATYDKPTGIVTVTPDKNDQVGNFALKPKIDASTNFTLLGQVNLGNRTSATGG
ADGIGFAFHNGNSTDIGNAGDNLGIGGLIDALGLKLDTWHNGAHMPEALRSGAQVSTTDANGYGxMTTTDQQIKAIDGHAYDRWWAQTDFNSVQALQVTY
EETNGHVLTWTKLAPVDRQAFAMVVSASTGGAKNLQQFKLESFDFQQAATMNVQYVDLNGRQLAQATVNYPDGAVVNGTYATSQLDISGYHFVNMGDNPT
TGISSPANGYLNRVGDNGTVIYVYDQNPVDYATTRVVHEMIHYLNEQQQVIAPSYQAQPITFLQVKYPTNGSISTYYSLGNNEVLLLNTAGQPLVTSTVR
WIPGEASTFSPVTNPNVQGYQAVSTDALNSNLSEIAAQMVTTTSKDLDLTVYYQSVIASTMIPDKPSEPAEPVLPQIPIIPSTPVKPTPLVVPTTPAMPT
KPVVPSRPSRLDQMAVSTKHPTRGQQPKRVIVSTIRSRSQHPVTTLTDKQVTLPQTNENVATVNWWAWILVIGGWLGSLVWWRRSRP


Copyright © 2010 Miaomiao Zhou
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