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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Protein with distant homolog in non-LAB species


GI:90962701
NCBI info 90962701 Gene: - Synonym: LSL_1732
SCL: @Lipid anchored Length 169 COG -
Species: Lactobacillus_salivarius_UCC118 Location 1821043..1821552 Strand: +
Product: Hypothetical secreted protein
Sequence:
MRKKLFLIPLFISLFLLGACSNNSTSQNSESSSNSSSVKTSKLVKSSSQKKSSSIKSSSSSSQSSSSSNEVASDSSNAIPSSSVSASSQSQDVTTDNNSV
LTSFLNASGVQLGNGDIAFITGENNGMYEIEIRTQSPGSTAVTNLKGIYHYNPTTGSIQKMDPTTGVFN


Protein Domain structure of 90962701 (Scale up the web page to see more details)


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Distant Homologs of 90962701 in the non-LAB species
Alignment GI Species Product Length Eval Identities Positives

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184153088Lactobacillus reuteri JCM 1112hypothetical protein LAR_0433 197 3e-040.31 0.53
 SSQSSSSSNEVASDSSNAIPSSSVSASSQSQDVTTDNNSVLTSFLNASGVQLGNGDIAFITGENNGMYEIEIRTQSPGSTAVTNLKGIYHYNPTTGSIQK  
 ++ S+ S+N+     S+++ S+  S S+ +   + ++  VLTSF+  SG+Q             N  Y+IE+R    G   V +L G Y Y+PTT  I +  
 TNSSAKSTNQTVKAPSSSVTSNPSSQSATTTSSSQNDQQVLTSFVKTSGIQQDGNHYYMTKNNQNNNYQIEVRNNQGGDPNVAHLTGTYQYDPTTNQIHE  

 MDPTTGVFN  
 M+P TG ++  
 MNPITGNYD  

Show aligned area

148543678Lactobacillus reuteri F275hypothetical protein Lreu_0443 197 3e-040.31 0.53
 SSQSSSSSNEVASDSSNAIPSSSVSASSQSQDVTTDNNSVLTSFLNASGVQLGNGDIAFITGENNGMYEIEIRTQSPGSTAVTNLKGIYHYNPTTGSIQK  
 ++ S+ S+N+     S+++ S+  S S+ +   + ++  VLTSF+  SG+Q             N  Y+IE+R    G   V +L G Y Y+PTT  I +  
 TNSSAKSTNQTVKAPSSSVTSNPSSQSATTTSSSQNDQQVLTSFVKTSGIQQDGNHYYMTKNNQNNNYQIEVRNNQGGDPNVAHLTGTYQYDPTTNQIHE  

 MDPTTGVFN  
 M+P TG ++  
 MNPITGNYD  



Copyright © 2010 Miaomiao Zhou
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