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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Protein with distant homolog in non-LAB species


GI:81427728
NCBI info 81427728 Gene: - Synonym: LSA0115
SCL: @Secretory(released) (with CS) Length 256 COG -
Species: Lactobacillus_sakei_23K Location 107334..108104 Strand: +
Product: Hypothetical cell surface protein precursor
Sequence:
MKLNEVIELKQQHYFRKLTVILTVVSLMLSLFDISALAAATDTKKQSPIESFVIRGLDDNEQAVPNAKINLKSENGKYDYTLSSDNRGFFKTVVETLTGH
TVRGIMPGKYHVSSIAAPTGYQLEKSNELIEIAADQANFYHLYYTDASQGDLVVKTQLQDGTPVSGVVLMAVNQKTNESYTAPASDDKGWTKLTLPTGRY
QLKVIFHPDSSEPQWAPTVTVSANQSLTTTVDFGKTKGEMMTTVTDQTTGDPLVGV


Protein Domain structure of 81427728 (Scale up the web page to see more details)


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Distant Homologs of 81427728 in the non-LAB species
Alignment GI Species Product Length Eval Identities Positives

Show aligned area

118480104Bacillus thuringiensis str. Al Hakamcell wall surface anchor family protein 723 0.0010.24 0.40
 DNEQAVPNAKINLKSENGKYDYTLSSDNRGFFKTVVETLTGHTVRGIMPGKYHVSSIAAPTGYQLEKSNELIEIAADQANFYHLYYTDASQGDL-VVKTQ  
 D    +PNA+  + +E GK      +D +G  K  +             GKY      AP GY + +     EI  +     H+      +G+L + K    
 DGNTKLPNAEFTIYNEQGKEVVKGKTDEKGVAKFKLPY-----------GKYTYKETIAPNGYVINEETFAFEIKENGEILKHIVQDKKVEGELEITKVD  

 LQDG-TPVSGVVLMAVNQKTNESYTAPASDDKGWTKLTLPTGRYQLKVIFHPDS---SEPQWAPTVTVSANQSLTTTVDFGKTKGEMMTTVTDQTTGD  
 + DG T +        N++  E      +D+KG  K  LP G+Y+ K    P+    +E  +A  +  +  Q +   V   K +GE+  T  D   G+  
 VADGNTKLPNAEFTIYNEQGKEVVKG-KTDEKGVAKFKLPYGKYKYKETIAPNGYVINEETFAFEIKENG-QIIKRIVQDKKVEGELEITKVDIADGN  



Copyright © 2010 Miaomiao Zhou
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