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Protein with distant homolog in non-LAB species
| GI:54307215 |
| NCBI info |
54307215 |
Gene: |
traF |
Synonym: |
pWCFS103_31 |
| SCL: |
@Intracellular /TMH start AFTER 60 |
Length |
472 |
COG |
- |
| Species: |
Lactobacillus_plantarum_WCFS1 |
Location |
22691..24109 |
Strand: |
- |
| Product: |
conjugation protein |
| Sequence: |
MSKLNQLLNIEVGTFKRQGNKLILELNHNQFRYDQLSELNELKQADSKFLQLVNVVEQDQKVVLTYTLPDKVRSLKDLPHENKAIRSAIAKEIMAQHVVN
DSQYHIALNPANLWYYPMQHVWYAYRANELMPYDDKHSNLAKYKALILFCLTGTPYERLLSNPQEALTKHPDDYLQQVAKATSLNELTEVVNGIEDFVSY
HEWQEVETAQQKAKQRLWLSMAGVAIVAVLAVGLVHKSDERKYQSLANQNQAQVTRLKYSGQIQTALNDQKWSEAQKDMKRAGYPSTKQVSAFLKHGQYQ
QALKVDPSQLNKVVNAAYANKDSGQVANWQLPTKATSKQKDQLKLEKAIVNYDTNTLNNQLSFTTNADVLLRMGQAFLAHNDTQDAQTVQTKLAGVNSPK
AQYLKALLSLNSAKNEVSDAQKKLDDANKIDGSKDKDKDKKVDSAKADLKNAQSDQSAAQKQVDQAKHKVGD
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Protein Domain structure of 54307215 (Scale up the web page to see more details) |
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Distant Homologs of 54307215 in the non-LAB species |
| Alignment |
GI |
Species |
Product |
Length |
Eval |
Identities |
Positives |
Show aligned area | 87159857 | Staphylococcus aureus subsp. aureus USA300 | transfer complex protein TraF | 426 |
9e-10 | 0.23 | 0.45 |
NQFRYDQLSELNELKQADSKFLQLVNVVEQDQKVVLTYTLPDKVRSLKDLPHENKAIRSAIAKEIMAQHVVNDSQYHIALNPANLWYYPMQHVWYAYRAN
++ RYD L+E NEL F ++ ++ ++ + Y ++ S E+KA++ ++ ++ + D+ ++PANL++ ++ + ++ +
DEIRYD-LTEPNEL------FFEVKDLQKEGDYFHIIYNTDNEYNSFLSAKKESKALKLSLMDYVLKVDPLKDNI--TVMHPANLFFKNIEDIKIGFKGH
ELMPYDDKHSNLAKYKALILFCLTGTPYERLLSNPQEALTKHPDDYLQQVAKATSLNELTEVV----NGIEDFVSYHEWQEVETAQQKAKQRLWLSMAGV
E +P K +NL +YK LI+ L+ +++ N E L+K DD+ +V A + +L E+V N ++ +E + ++K + L L G+
EYLP-KPKINNLEQYKLLIMSTLSQYTFDKYYRNKFEVLSKEKDDFFHKVNNAETFEKLKEIVRHELNQVQTDYLLNEEKRKRETRKKYIRNLILGFVGI
AIVAVLAVGLVHKSDERKYQSLANQNQAQVTRLKYSGQIQTALNDQKWSEAQKDMKRAGYPSTKQVSAFL-KHGQYQQALKVDPSQLNKVVNAAYANKDS
AIV L ++ +++ S Q Q R K + DQ A K MKR + K + L K +Y++ +++ V+ Y
AIVISLISFMIINGKQQELDSKIAQADKQEQRSKVYENLYNGNVDQ----AVKGMKRDDSFNKKDIEKTLKKEKKYEELIELSSKNTPYVIEQLYKEGKQ
GQVANWQLPTKATSKQKDQLKLEKAIVNYD
++ + D L LEK I++ D
NKIRELAF----NFENNDTLSLEKKILDKD
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