LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Protein with distant homolog in non-LAB species

GI:42518692
NCBI info	42518692	Gene:	-	Synonym:	LJ0769
SCL:	@Secreted via minor pathways (bacteriocin) (no CS)	Length	75	COG	-
Species:	Lactobacillus_johnsonii_NCC_533	Location	668015..668242	Strand:	+
Product:	bacteriocin lactacin F, subunit LafA precursor
Sequence:	MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGFGKIRK

Protein Domain structure of 42518692 (Scale up the web page to see more details)

View this figure in PNG format

Distant Homologs of 42518692 in the non-LAB species

Alignment	GI	Species	Product	Length	Eval	Identities	Positives
Show aligned area	209558965	Streptococcus pyogenes NZ131	Putative bacteriocin	75	1e-06	0.43	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + G+ +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGSPIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	94988025	Streptococcus pyogenes MGAS9429	bacteriocin	103	3e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	71903049	Streptococcus pyogenes MGAS6180	bacteriocin	103	3e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	94991911	Streptococcus pyogenes MGAS2096	bacteriocin	103	3e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	139474282	Streptococcus pyogenes str. Manfredo	putative bacteriocin	98	4e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	19745608	Streptococcus pyogenes MGAS8232	putative BlpM homologue	98	4e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	94993805	Streptococcus pyogenes MGAS10750	Bacteriocin	90	6e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	21909875	Streptococcus pyogenes MGAS315	putative bacteriocin	90	7e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	50913768	Streptococcus pyogenes MGAS10394	bacteriocin	90	7e-06	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	222152676	Streptococcus uberis 0140J	bacteriocin	88	1e-05	0.44	0.59
QFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF +F+ + + L V+GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF EFDSIDTELLEKVIGGKNNWQANVSGILAAGAAGAAIGAPVCGLACGYIGAKTAITLWAGVTGATGGF
Show aligned area	94989907	Streptococcus pyogenes MGAS10270	bacteriocin	90	2e-05	0.43	0.59
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + A V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKFAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	28896429	Streptococcus pyogenes SSI-1	putative gassericin T	75	9e-05	0.44	0.60
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGPACAVAGAHYLPILWTAVTAATGGF ++ F+ ++ + LA V GG+NNWQ NV G + + GA +G +CG AC GA LW VT ATGGF LETFHQMTIEKLAKVEGGKNNWQANVSGVIAAGSAGAAIGFPVCGVACGYIGAKTAITLWAGVTGATGGF
Show aligned area	195978619	Streptococcus equi subsp. zooepidemicus MGCS10565	bacteriocin BlpM-like	84	3e-04	0.46	0.53
MKQFNYLSHKDLAVVVGGRNNWQTNVGGAVGSAMIGATVGGTICGP---------ACAVAGAHYLPILWTAVTAATGGF MKQF + LA V GG+NNWQTNV +A+ G T+G TIC AC GA + LW VT ATGGF MKQFEIIDADKLAHVEGGKNNWQTNVWEGGTAAVGGWTLGTTICAASGAGAPFMGACGYIGAKFGVSLWAGVTGATGGF