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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Protein with distant homolog in non-LAB species


GI:29377947
NCBI info 29377947 Gene: - Synonym: EF_B0055
SCL: @N-terminally anchored (No CS) Length 164 COG COG0526OC
Species: Enterococcus_faecalis_V583 Location 48866..49360 Strand: +
Product: putative lipoprotein
Sequence:
MNKKTVILLIIGFTAVSIGIACFLQFKDRTKELEVTVDPIALKINTITPNNLDGYLKKHKTAYVYFGRPDCSDCNEFDPNLIKSIDKYKVYDKLIYVNLI
EVRKDKQLWEKFKQKYGIKYTPTLAKYEYDERKNKQKPKFIVQWTPENGTVLKDFDNFVSKIEK


Protein Domain structure of 29377947 (Scale up the web page to see more details)


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Distant Homologs of 29377947 in the non-LAB species
Alignment GI Species Product Length Eval Identities Positives

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16801083Listeria innocua Clip11262hypothetical protein lin2017 157 1e-050.34 0.49
 KTVILLIIGFTAVSIGIACFLQFKDRTKELEVTVDPIALKINTITPNNLDGYLKKHKTAYVYFGRPDCSDCNEFDPNLIKSIDKYKVYDKLIYVN  
 K +ILL+  FT V    AC    K+  ++ + T    A  +NTI+  +    +    T +VY GRP C DC  F P L K ++K +   K+ Y N  
 KKIILLLALFTVVLTLGACGDNKKETEEKTKQTEKESATFLNTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELEKRQPDQKMAYYN  

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116873338Listeria welshimeri serovar 6b str. SLCC5334secreted thioredoxin, putative 157 1e-040.31 0.50
 KKTVILLIIGFTAVSIGIACFLQFKDRTKELEVTVDPIALKINTITPNNLDGYLKKHKTAYVYFGRPDCSDCNEFDPNLIKSIDKYKVYDKLIYVN  
 KK ++L+ I  T +++G AC    K+  ++   T    A  +NTI+  +    +    T +VY GRP C DC  F P L K + + K+   + Y N  
 KKILLLIAIITTVLTLG-ACGEDKKETEEKANQTEKESATFLNTISTKDFKQQMADKTTGFVYVGRPTCEDCQAFQPILKKELKERKLNQNMNYYN  

Show aligned area

16803942Listeria monocytogenes EGD-ehypothetical protein lmo1903 157 2e-040.31 0.49
 KKTVILLIIGFTAVSIGIACFLQFKDRTKELEVTVDPIALKINTITPNNLDGYLKKHKTAYVYFGRPDCSDCNEFDPNLIKSIDKYKVYDKLIYVN  
 KK V+LL +    +++G AC    K+  ++   T +  A  + TI+  +    +    T +VY GRP C DC  F P L K + K +   K+ Y N  
 KKIVLLLALITVVLTVG-ACSDNKKETEEKANKTEEESATFLTTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYN  

Show aligned area

46908136Listeria monocytogenes str. 4b F2365bacteriocin transport accessory protein, putative 157 7e-040.29 0.45
 KTVILLIIGFTAVSIGIACFLQFKDRTKELEVTVDPIALKINTITPNNLDGYLKKHKTAYVYFGRPDCSDCNEFDPNLIKSIDKYKVYDKLIYVN  
 K ++LL+   T +    AC    K+  ++   T    A  + TI+  +    +    T +VY GRP C DC  F P L K + K +   K+ Y N  
 KKILLLLTSITVILTLGACGDNKKETEEKANQTEKESASFLTTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYN  



Copyright © 2010 Miaomiao Zhou
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