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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Protein with distant homolog in non-LAB species

GI:184154713
NCBI info 184154713 Gene: - Synonym: LAF_0237
SCL: @LPxTG Cell-wall anchored Length 742 COG -
Species: Lactobacillus_fermentum_IFO_3956 Location 301213..303441 Strand: +
Product: hypothetical protein
Sequence: 
MNKKKMIRLTALVGVATATGVVAEANQAHAATTTTTETTNQTTNASVESTQAAVDAAQSAFDTAQTSVDNAQANVTSASNNVTSASATLSSAIANKEAAT
SENIASATSAVSSQAVVVASASQAVSEQAGVVSAAASVQASAQAEATSASASLFSSSANVASATSALSAAEAALTSDQSTAANNLSAAESAASSASAAVS
SGQAAVDNAQAAVASAQAIVDAVAEVQSSDVINMSVAYITALKNYLANPSSANAAALQEVAKGADYVKELQQKFKSDASLDVVVDPSDPTVQEALSVYAV
NLINHLRNQYGLTTAFGASANANVAAIDFVKKYYDDEDWNIFGTTGSDGKGHNKNGLDAYADQLNTSIAEDAGSGLTTWVNGKATMATTTLHNLLYAVYS
DIATMLFDDGGTNNWSHAQSIFEDGTILGTDGFNNVYLGVAFDKYGYAHYELYNATEGNHLGNNAYSLDVQTVAQALLTNAQASLASAKASLQRMTTNLM
VAKAAVVAAQNQLAVLENSSANDLVAVTKARTQLASAETSYQTALATYKQKEEALKKAGDNLAAAQASLEAAQATLATAKAKLAELEETVANLTNADQLL
AAAQAAYEQAVANLTTATGNLGAAQVDLAKAESQLALAEDTAEQAKVRAAIAAQVDQQLNGSTANDHQSAEQDATSLKTNGRALTATVATASAAKQKQGA
NQGRLPQTGNDDQEASTMALVGLEMLGMATGLYGYKKKKLTK


Protein Domain structure of 184154713 (Scale up the web page to see more details)


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Distant Homologs of 184154713 in the non-LAB species
Alignment GI Species Product Length Eval Identities Positives

Show aligned area

125718117Streptococcus sanguinis SK36hypothetical protein SSA_1301 853 1e-040.28 0.43 
 ATTTTTETTNQTTNASVESTQAAVDAAQSAFDTAQTSVDNAQANVTSASNNVTSASATLSSAIANKEAATSENIASATS--------------AVSSQAV  
 A   T  T    T A V   Q   +AA++  D  ++ VD A+     A  +V  A A + +A   +  AT EN+A A +              AV   A   
 APKATEVTEKPVTAADVAVAQENAEAAKAKLDQQRSIVDTAKTEAEDAKTSVKVAEAAVETAKEVQAEATEENVAKAETEAKTAEQEVGAKDTAVREAAA  

 VVASASQAVSEQAGVVSAAASVQASAQAEATSASASLFSSSANVASATSALSAAEAALTSDQSTAANNLSAAESAASSASAAVSSGQAAVDNAQAAVASA  
   A A QAV +QA  + A+ S+   A+ E   A   L S    VA+A S  S A+ AL      A   L+ AE AASSA    +  Q  ++ A+A+++    
 KAAKADQAVKDQANTIKASQSLVDIAETELKQAKTPLNSEEQAVATAKSQQSQAQTAL----DNAKTELTKAEQAASSAPQVQAEIQNKINQAKASLSQT  

 QAIVDAVAEVQSSDVINMSVAYITALKNYLAN---PSSANAAALQEVAKGADYVKELQQKFKSDASLDVVVDPSDP  
    + ++ E Q       +      L+N   +    +  N AA QE+   A+    + Q+ +++  + V  DP+ P  
 NQAISSL-EGQIPAAEKAAATAPVDLRNTTYSQFLENVRNNAANQEIRDAANNALAVYQRGQNEFGISVNSDPTSP

Show aligned area

146329281Dichelobacter nodosus VCS1703Ahypothetical protein DNO_0358 1046 4e-040.24 0.41 
 SLDVQTVAQALLTNAQASLASAKASLQRMTTNLMVAKAAVVAAQNQLAVLENSSAN---DLVAVTKARTQLASAETSYQTALATYKQKEEALKKAGDNLA  
 +++ +  A+       A+L  AK  L     +L   +  + AAQ +L  ++   A    DL      + QLA     Y+      ++ +  L     +L   
 AVEKEETAKQEYDRCNAALEEAKNELAAQQQSLTAKQQEITAAQAELERVQQEIAQFNQDLATKQAEQEQLAKCTAEYEKEQKMLEETKNELAAQQQSLT  

 AAQASLEAAQATLATAKAKLAELEETVANLTNADQLLAAAQAAYEQAVANLTTATGNLGAAQVDLAKAESQLALAEDTAEQAKVRAAIAAQVDQQLNGST  
 A Q  + AAQA L   + ++A+  + +A      + LA   A YE+    L      L A Q  L   +++ + A+    Q  V +A    V QQL      
 AKQQEITAAQAELERVQQEIAQFNQELATKQAEQENLAKCAAEYEKEQKMLEETKNELAAQQQSLTAKQAEASRAQLVKIQPTVTSAEDCLVSQQLQQMQ  

 AN  
 A+  
 AD

Show aligned area

217964710Listeria monocytogenes HCC23ABC transporter, permease protein 1136 4e-040.27 0.44 
 AQALLTNAQASLASAKASLQRMTTNLMVAKAAVVAAQNQLAVLENSSANDLVAVTK----ARTQLASAETSYQTALATYKQKEEALKKAGDNLAAAQASL  
  +A L   +A LA+AKA L+   +    AKA+  A   Q      +   +L +  K    A+TQ+   ET+   A    ++   A + A + L  A   L  
 GKAELQENEAKLANAKAQLEEGFSEYNAAKASYEAKIKQGEAEIANGEAELRSAKKQLDTAKTQIDQGETALSQAEMELEEGRAAWEDANNFLNTANGYL  

 EAAQATLATA--KAKLAELEETVANLTNADQLLA-------AAQAAYEQAVANLTT--ATGNLGAAQVD--LAKAESQLALAEDTAEQAKVRAAIAAQVD  
  +A++TL  A  +  L + E    +LTN+ Q+LA       A +A YE A+  L      GN+  A++   L  A +Q+  AE+  + A+       Q    
 RSAKSTLENALKQPDLTDFELDRNSLTNSFQMLASELELSSAERAEYENAMNQLLDDYENGNISDAEIREALNAALAQVGNAENEYQSARATLDAEKQKI  

 QQLNGSTANDHQSAEQDATSLKTNGRALTATVATASAAKQK  
 +Q   + A   Q  +Q  T+ +       A +   S AKQ+  
 EQGEQTLAAKEQELQQAKTAYQEGLAKYQAGLEKISQAKQQ

Show aligned area

113476009Trichodesmium erythraeum IMS101RND family efflux transporter MFP subunit 609 4e-040.32 0.52 
 ATATGVVAEANQAHAATTTTTETTNQTTNASVESTQAAVDAAQSAFDTAQTSVDNAQANVTSASNNVTSASATLSSAIANKEAATSENIASATSAVSSQA  
 +TAT    E  +   A   + +       A+++S QA VD A++  D+AQ  VD A +NV SA   V SA A+LSS IA   +A ++  ++  +  S+QA  
 STATKTAREGVRVAKANINSAQAKVDIAEANIDSAQAKVDIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTIAQLRSAEAKVNSAKANISSAQA  

 VVVASASQAVSEQAGVVSAAASVQASAQAEATSASASLFSSSAN  
  V    + A+S     +S+ +S +A  + + T  S +L  + AN  
 EV----NSALSNINSAMSSVSSDEARLEEKQTQLSQTLVKAPAN

Show aligned area

113476009Trichodesmium erythraeum IMS101RND family efflux transporter MFP subunit 609 0.0010.31 0.49 
 QAHAATTTTTETTNQTTNASVESTQAAVDAAQSAFDTAQTSVDNAQANVTSASNNVTSASATLSSAIANKEAATSENIASATSAVSSQAVVVASASQAVS  
 +  +  T T     +   A++ S QA VD A++  D+AQ  VD A+AN+ SA   V  A + + SA A  E+A              QA + ++ +Q  S  
 ETRSTATKTAREGVRVAKANINSAQAKVDIAEANIDSAQAKVDIAEANIDSAQAKVDIAGSNVRSAEARVESA--------------QASLSSTIAQLRS  

 EQAGVVSAAASVQASAQAEATSASASLFSSSANVASATSALSAAEAALTSDQSTAANNLSAAESAASSASAAVSS  
  +A V SA A++ +SAQAE  SA +++ S+ ++V+S  + L   +  L+     A  N   AE  A     + SS  
 AEAKVNSAKANI-SSAQAEVNSALSNINSAMSSVSSDEARLEEKQTQLSQTLVKAPANGILAERIARVGDVSSSS

Show aligned area

46907443Listeria monocytogenes str. 4b F2365ABC transporter, permease protein 1136 0.0010.27 0.44 
 AQALLTNAQASLASAKASLQRMTTNLMVAKAAVVA----AQNQLAVLENSSANDLVAVTKARTQLASAETSYQTALATYKQKEEALKKAGDNLAAAQASL  
  +A L   +A LA+AKA L+   +    AKA+  A     + ++A  E    +    +  A+TQ+   ET+   A    ++   A + A + L  A   L  
 GKAELQENEAKLANAKAQLEEGFSEYNAAKASYDAKIKHGEAEIANGEAELRSAKKQLDTAKTQIDQGETALSQAEMELEEGRAAWEDANNLLNTANGYL  

 EAAQATLATA--KAKLAELEETVANLTNADQLLA-------AAQAAYEQAVANLTT--ATGNLGAAQVD--LAKAESQLALAEDTAEQAKVRAAIAAQVD  
  +A++TL  A  +  L + E    +LTN+ Q+LA       A +A YE A+  L      GN+  A++   L  A +Q+  AE+  + A+       Q    
 RSAKSTLENALKQPDLTDFELDRNSLTNSFQMLASELDLSSAERAEYENAMNQLLDDYENGNISDAEIREALNAALAQVGNAENEYQSARATLDAEKQKI  

 QQLNGSTANDHQSAEQDATSLKTNGRALTATVATASAAKQK  
 +Q   + A   Q  +Q  T+ +       A +   S AKQ+  
 EQGEQTLAAKKQELQQAKTAYQEGLAKYQAGLEKISQAKQQ


Copyright © 2010 Miaomiao Zhou
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