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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Protein with distant homolog in non-LAB species


GI:15673049
NCBI info 15673049 Gene: ykhK Synonym: L78458
SCL: @Secretory(released) (with CS) Length 243 COG -
Species: Lactococcus_lactis_lactis_IL1403 Location 1078747..1079478 Strand: +
Product: hypothetical protein
Sequence:
MSHLKNNLVFSSLTILLVTGGSLGLAQSAHNKVSSQKLEAKNVNQVSNYSGDIDLLTVSQPTTPTTNNGQINQYFINRFDNAISLLNGKYVVNHNVLPQN
TSGEEINILNESVKIANQQLIVGAQKIEKSDIDVKVVQKGNSIILAENPTTLKNSATSMATKHVGVTKVEFHWYGVRLFLSKNDVNKILKYGPTSVSIAT
IWMPTTWVVKLAASAAVACGWMSSVNGGIWIDWGLIPTKWGWQ


Protein Domain structure of 15673049 (Scale up the web page to see more details)


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Distant Homologs of 15673049 in the non-LAB species
Alignment GI Species Product Length Eval Identities Positives

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16802680Listeria monocytogenes EGD-ehypothetical protein lmo0638 209 1e-050.32 0.46
 VGAQKIEKSDIDVKVVQKGNSIILAENPTTLKNSATSMATKHVGVTKVEFHWYGVRLFLSKNDVNKILKYGPTSVSIATIWMPTTWVVKLAASAAVACGW  
 V  Q  E +++        ++ ++A  P   +        K  GV KV +HW   R+ LSKN V  +       +SIA IW+P   V K+ AS  V  G+  
 VNKQVAETNNLLTLATNDSSTNVIAVTPEGKETVVKRGLLKGAGVNKVTYHWNYARIRLSKNTVRTM----GVGLSIAGIWLPLKVVSKVCASLGVGTGF  

 MSSVNGGIWIDW----GLIPTKWGWQ  
    V  GIW D+     L+ T +GWQ  
 ---VKHGIWFDYNYFSNLLLTGYGWQ  



Copyright © 2010 Miaomiao Zhou
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