GET /cedar/api/samples?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "links": {
        "next": "http://localhost/cedar/api/samples?format=api&page=2",
        "previous": null
    },
    "count": 222,
    "total_pages": 23,
    "results": [
        {
            "smp_accession": "CRS241",
            "name": "hrCN_Pf_Gam_45-60_SucroseFraction",
            "organism_part": [
                {
                    "term_name": "Plasmodium Stage V Gametocyte",
                    "term_code": "NA"
                }
            ],
            "condition": [
                {
                    "term_name": "Wild-type",
                    "term_code": "NA"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "whole cell",
                    "term_code": "NA"
                }
            ],
            "experiment": "CRX48",
            "protein_file": {
                "id": 143,
                "file_type": "Protein",
                "name": "20240131_ComptabFile_GIP_ProteinLevel",
                "description": "File containing raw protein abundances and protein length corresponding to the samples from the \"Complexome profiling of subcellular fractions of Plasmodium falciparum gametocytes\" experiment. Furthermore unique peptides and coverage are reported. Regrettably, the underlying data stems from a proteome search that included samples which are not relevant to this experiment and subsequent analysis by GIP. While analysis results were corrected accordingly, we cannot accurately do so for unique peptides and coverage. As a result, values given in the comptab file are an overestimation of the real values if only these samples were used for the proteome search.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/20240131_ComptabFile_GI_2P.txt"
            },
            "peptide_file": null,
            "processed_file": null,
            "gel": "CRP60",
            "created_at": "2024-05-08T14:34:47.600868Z",
            "updated_at": "2024-05-08T14:34:47.601937Z",
            "species": [
                {
                    "term_name": "Plasmodium falciparum NF54",
                    "term_code": "NCBITaxon:5843"
                }
            ]
        },
        {
            "smp_accession": "CRS240",
            "name": "hrCN_Pf_Gam_35-45_SucroseFraction",
            "organism_part": [
                {
                    "term_name": "Plasmodium Stage V Gametocyte",
                    "term_code": "NA"
                }
            ],
            "condition": [
                {
                    "term_name": "Wild-type",
                    "term_code": "NA"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "whole cell",
                    "term_code": "NA"
                }
            ],
            "experiment": "CRX48",
            "protein_file": {
                "id": 143,
                "file_type": "Protein",
                "name": "20240131_ComptabFile_GIP_ProteinLevel",
                "description": "File containing raw protein abundances and protein length corresponding to the samples from the \"Complexome profiling of subcellular fractions of Plasmodium falciparum gametocytes\" experiment. Furthermore unique peptides and coverage are reported. Regrettably, the underlying data stems from a proteome search that included samples which are not relevant to this experiment and subsequent analysis by GIP. While analysis results were corrected accordingly, we cannot accurately do so for unique peptides and coverage. As a result, values given in the comptab file are an overestimation of the real values if only these samples were used for the proteome search.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/20240131_ComptabFile_GI_2P.txt"
            },
            "peptide_file": null,
            "processed_file": null,
            "gel": "CRP60",
            "created_at": "2024-05-08T14:34:47.587411Z",
            "updated_at": "2024-05-08T14:34:47.588646Z",
            "species": [
                {
                    "term_name": "Plasmodium falciparum NF54",
                    "term_code": "NCBITaxon:5843"
                }
            ]
        },
        {
            "smp_accession": "CRS239",
            "name": "hrCN_Pf_Gam_25-35_SucroseFraction",
            "organism_part": [
                {
                    "term_name": "Plasmodium Stage V Gametocyte",
                    "term_code": "NA"
                }
            ],
            "condition": [
                {
                    "term_name": "Wild-type",
                    "term_code": "NA"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "whole cell",
                    "term_code": "NA"
                }
            ],
            "experiment": "CRX48",
            "protein_file": {
                "id": 143,
                "file_type": "Protein",
                "name": "20240131_ComptabFile_GIP_ProteinLevel",
                "description": "File containing raw protein abundances and protein length corresponding to the samples from the \"Complexome profiling of subcellular fractions of Plasmodium falciparum gametocytes\" experiment. Furthermore unique peptides and coverage are reported. Regrettably, the underlying data stems from a proteome search that included samples which are not relevant to this experiment and subsequent analysis by GIP. While analysis results were corrected accordingly, we cannot accurately do so for unique peptides and coverage. As a result, values given in the comptab file are an overestimation of the real values if only these samples were used for the proteome search.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/20240131_ComptabFile_GI_2P.txt"
            },
            "peptide_file": null,
            "processed_file": null,
            "gel": "CRP60",
            "created_at": "2024-05-08T14:34:47.519692Z",
            "updated_at": "2024-05-08T14:34:47.532141Z",
            "species": [
                {
                    "term_name": "Plasmodium falciparum NF54",
                    "term_code": "NCBITaxon:5843"
                }
            ]
        },
        {
            "smp_accession": "CRS238",
            "name": "CRISTA_KO_L_2",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "gene knock out",
                    "term_code": "EFO:0000506"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.572989Z",
            "updated_at": "2023-12-07T23:30:32.574095Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        },
        {
            "smp_accession": "CRS237",
            "name": "CRISTA_KO_L_1",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "gene knock out",
                    "term_code": "EFO:0000506"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.558073Z",
            "updated_at": "2023-12-07T23:30:32.560163Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        },
        {
            "smp_accession": "CRS236",
            "name": "CRISTA_KO_H_2",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "gene knock out",
                    "term_code": "EFO:0000506"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.544290Z",
            "updated_at": "2023-12-07T23:30:32.545482Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        },
        {
            "smp_accession": "CRS235",
            "name": "CRISTA_KO_H_1",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "gene knock out",
                    "term_code": "EFO:0000506"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.527862Z",
            "updated_at": "2023-12-07T23:30:32.529586Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        },
        {
            "smp_accession": "CRS234",
            "name": "Control_L_2",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "control",
                    "term_code": "EFO:0001461"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.510575Z",
            "updated_at": "2023-12-07T23:30:32.512128Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        },
        {
            "smp_accession": "CRS233",
            "name": "Control_L_1",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "control",
                    "term_code": "EFO:0001461"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.495683Z",
            "updated_at": "2023-12-07T23:30:32.496999Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        },
        {
            "smp_accession": "CRS232",
            "name": "Control_H_2",
            "organism_part": [
                {
                    "term_name": "HEK-293 cell",
                    "term_code": "BTO:0000007"
                }
            ],
            "condition": [
                {
                    "term_name": "control",
                    "term_code": "EFO:0001461"
                }
            ],
            "cell_compartment": [
                {
                    "term_name": "mitochondrion",
                    "term_code": "GO:0005739"
                }
            ],
            "experiment": "CRX47",
            "protein_file": {
                "id": 141,
                "file_type": "Protein",
                "name": "Protein Groups",
                "description": "List of all identified proteins and the iBAQ values from the different replicates of control and CRISTA KO mitochondria isolated from cells grown in \"heavy\" or \"light\" media (SILAC).",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/Complexome_dataset_CRISTAko_CompTab.txt"
            },
            "peptide_file": null,
            "processed_file": {
                "id": 142,
                "file_type": "Processed",
                "name": "Complexome dataset, CRISTA, processed",
                "description": "SILAC-Complexome profiling dataset of mitochondria from Control and CRISTA KO cells.",
                "data_file": "https://www3.cmbi.umcn.nl/cedar/media/sampledata/P22_081_CP_CRISTAko_processed_CEDAR.xlsx"
            },
            "gel": "CRP59",
            "created_at": "2023-12-07T23:30:32.475373Z",
            "updated_at": "2023-12-07T23:30:32.480571Z",
            "species": [
                {
                    "term_name": "Homo sapiens",
                    "term_code": "NCBITaxon:9606"
                }
            ]
        }
    ]
}