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LAB-Secretome DB
A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

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Protein with distant homolog in non-LAB species


GI:58337884
NCBI info 58337884 Gene: - Synonym: LBA1624
SCL: @Intracellular Length 45 COG -
Species: Lactobacillus_acidophilus_NCFM Location 1627314..1627451 Strand: -
Product: putative transporter
Sequence:
MEYDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMPAI


Protein Domain structure of 58337884 (Scale up the web page to see more details)


View this figure in PNG format

Distant Homologs of 58337884 in the non-LAB species
Alignment GI Species Product Length Eval Identities Positives

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161507946Lactobacillus helveticus DPC 4571hypothetical protein lhv_1732 296 8e-120.76 0.88
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 YDSWM NLAN+NDI VT+VG+QLMGLKQ D+ HIWY+L MP  
 YDSWMTNLANANDIHVTKVGEQLMGLKQGDNPHIWYNLDMP  

Show aligned area

42519748Lactobacillus johnsonii NCC 533ABC transporter solute-binding component 299 4e-060.61 0.68
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 YDSWM  LA S D K   VG+ LMGLK  D+ HIWY+L MP  
 YDSWMNKLAKSVDKKPVLVGEDLMGLKSGDNPHIWYNLDMP  

Show aligned area

116513769Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365ABC-type metal ion transport system, periplasmic component/surface adhesin 293 5e-060.56 0.67
 MEYDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 M YDSWM NLA SN  K  +VG+ LM L    + HIWY+L+MP  
 MGYDSWMGNLAASNGKKAVKVGEDLMQLDSRANPHIWYNLNMP  

Show aligned area

104773765Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842substrate binding protein 293 5e-060.56 0.67
 MEYDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 M YDSWM NLA SN  K  +VG+ LM L    + HIWY+L+MP  
 MGYDSWMGNLAASNGKKAVKVGEDLMQLDSRANPHIWYNLNMP  

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116630276Lactobacillus gasseri ATCC 33323ABC-type metal ion transport system, periplasmic component/surface adhesin 308 6e-060.59 0.71
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 YDSWM  LA S + K   VG+ LMGLK  D+ HIWY+L+MP  
 YDSWMNKLAKSVNKKPVLVGEDLMGLKNGDNPHIWYNLNMP  

Show aligned area

116629908Lactobacillus gasseri ATCC 33323ABC-type metal ion transport system, periplasmic component/surface adhesin 297 1e-050.54 0.71
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 YDSW+A LA S++     VG+ LM LK  D+ HIW+DL+MP  
 YDSWLAKLAKSSNKSAVLVGEDLMNLKSGDNPHIWFDLNMP  

Show aligned area

58338026Lactobacillus acidophilus NCFMABC transporter, periplasmatic component 298 2e-050.59 0.71
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 YDSWM  LA+S D K   VG++LM LK+  + HIWY LSMP  
 YDSWMNKLASSVDKKPVLVGEELMKLKKGANPHIWYSLSMP  

Show aligned area

42518826Lactobacillus johnsonii NCC 533hypothetical protein LJ0901 296 3e-040.49 0.63
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDLSMP  
 YDSW+  LA S +     VG+ LM LK   + HIW+DL+MP  
 YDSWLPKLAKSTNKSAVLVGEDLMNLKNGANPHIWFDLNMP  

Show aligned area

161508028Lactobacillus helveticus DPC 4571hypothetical protein lhv_1842 325 5e-040.58 0.68
 YDSWMANLANSNDIKVTEVGKQLMGLKQDDDLHIWYDL  
 YDSWM  LA+S   K   VG+ LMGLK+ D+ HIWYD   
 YDSWMNKLASSVSKKPVLVGEDLMGLKKVDNPHIWYDF  



Copyright © 2010 Miaomiao Zhou
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