LAB-Secretome DB


LAB-Secretome DB A comparative analysis of the predicted secretomes of Lactic Acid Bacteria

Protein with distant homolog in non-LAB species

GI:58337618
NCBI info	58337618	Gene:	-	Synonym:	LBA1345
SCL:	@Intracellular	Length	89	COG	COG4166E
Species:	Lactobacillus_acidophilus_NCFM	Location	1319724..1319993	Strand:	-
Product:	putative oligopeptide ABC transporter substrate bindingprotein
Sequence:	MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLRESNEEMNPNKRLESLVKAEEVLDAQQPLTPLYHDGQAWMVRKMFII

This is a concatenated pseudogene: 58337620_58337619_58337618

Sequence:

MKKWLKLLESSLVTTSVTAVLSTCSNNSSGNQKYDRSLSWMTTSEIQTLDQTKMVDTTSGEQADNVFEGLNRLDSDGKVKPGVATKSVASKDGKTWTFTF
RKNARWSNGDQVTANDFVYALQRTLDPRTQSQQQNIYQAVKNANEVVAGKTSPHNLGVKAKDRHTLVVHLTHPVPYFKTMTASNxMTYSLTKNKDLANVN
LRRAISMALNRKVLASTVGGANTPATTFTGPQETVDGKNFNKYFAQTNATSKYTNYDKAQARKLLNLALKELGKSKVEFTLAGDDDVVSKKVMEYVQSQL
ESTFTKKWxMVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLRESNEEMNPNKRLESLVKAEEVLDAQQPLTPLYHDGQAWMVRKMFII

Protein Domain structure of 58337618 (Scale up the web page to see more details)

View this figure in PNG format

Distant Homologs of 58337618 in the non-LAB species

Alignment	GI	Species	Product	Length	Eval	Identities	Positives
Show aligned area	104773447	Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842	oligopeptide ABC transporter, substrate binding protein	530	4e-12	0.38	0.61
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDP-NLITYLRE---------SNEE----------MNPNKRLESLVKAEEVLDAQQPLTPLYHDGQA M ++V ++PKTTRVS + N+D+ GLT+ + DP + + Y++ SN+E M+ KR ++L+KAE++L Q+ ++PLYH GQA MTVSVNNLPKTTRVSRQIANNFDVVLGGLTSDFPDPYHFLAYMQSGQTYNFGKWSNKEYDKAVKASLTMDKTKRRKALLKAEKILIDQEAISPLYHMGQA WMVR WM+R WMIR
Show aligned area	116513435	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	ABC-type oligopeptide transport system, periplasmic component	548	8e-12	0.38	0.60
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDP-NLITYLRE---------SNEE----------MNPNKRLESLVKAEEVLDAQQPLTPLYHDGQA M ++V ++PKTTRVS + N+D+ GLT+ + DP + + Y++ SN+E M KR ++L+KAE++L Q+ ++PLYH GQA MTVSVNNLPKTTRVSRQIANNFDVVLGGLTSDFPDPYHFLAYMQSGQTYNFGKWSNKEYDKAVKASLTMAKTKRRKALLKAEKILIDQEAISPLYHMGQA WMVR WM+R WMIR
Show aligned area	116513389	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	ABC-type oligopeptide transport system, periplasmic component	541	3e-07	0.32	0.52
INVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDP----NLIT-----------------YLRESNEEMNPNKRLESLVKAEEVLDAQQPLTPLYHDGQAW + V+S+PK TR++ M++GN+D+ T + DP +L T Y+ S + + R + L KAE++L +Q +TPLYH +AW VQVQSIPKKTRMNKMMSGNFDVVSTRWNADFADPISFLDLQTTGASYNYGKWSNKTYDKYVAASKTTGSTSTRFKELAKAEQILLEEQGVTPLYHPVEAW MVR MV+ MVK
Show aligned area	104773405	Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842	peptide binding protein	541	3e-07	0.32	0.52
INVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDP----NLIT-----------------YLRESNEEMNPNKRLESLVKAEEVLDAQQPLTPLYHDGQAW + V+S+PK TR++ M++GN+D+ T + DP +L T Y+ S + + R + L KAE++L +Q +TPLYH +AW VQVQSIPKKTRMNKMMSGNFDVVSTRWNADFADPISFLDLQTTGASYNYGKWSNKTYDKYVAASKTTGSTSTRFKELAKAEQILLEEQGVTPLYHPVEAW MVR MV+ MVK
Show aligned area	161506797	Lactobacillus helveticus DPC 4571	ABC-type oligopeptide transport system, periplasmic component	543	4e-07	0.33	0.49
INVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLRESNEEMN---------------------PNKRLESLVKAEEVLDAQQPLTPLYHDGQAW + V+S+PK T +++ +GNYD+ G T ++DP L S N KR + LVKAE+ + + Q +TPLYH +AW VRVQSIPKKTALNHAGSGNYDVFLMGWTADFSDPISFLDLNTSKNSQNWEKYSDPTYDKLVADSKVTPSETKRWDDLVKAEQRIISTQGVTPLYHPEEAW MVR MVR MVR
Show aligned area	58336539	Lactobacillus acidophilus NCFM	peptide binding protein	542	7e-07	0.35	0.48
VKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLRESNEEMNPNK---------------------RLESLVKAEEVLDAQQPLTPLYHDGQAWMV V+S+PK T + + NG+YD+ G T ++DP L +N N K R SLVKAE+ + Q +TPLYH +AWMV VQSIPKKTALDHAGNGDYDVFLMGWTADFSDPISFLDLNTTNNSQNWEKYSDSTYDKLIAESKVTPSETTRWNSLVKAEQRIIDTQGVTPLYHPEEAWMV R R R
Show aligned area	90962668	Lactobacillus salivarius UCC118	oligopeptide-binding protein oppA	537	2e-05	0.30	0.45
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLRESNEEMNPNK---------------------RLESLVKAEEVLDAQQPLTPLYHDGQ + +N +++P TR+S +G++D+ + + DP L SN E N K R L KAE++L Q +TPLY+ Q VTVNTQTVPFKTRLSRSTSGDFDVVLSAWGADFADPISFLDLFTSNNEQNNGKWSNAEYDKLIAASKNASSASDRWSDLEKAEKILLQDQGVTPLYYRNQ AWMV AWMV AWMV
Show aligned area	161506796	Lactobacillus helveticus DPC 4571	oligopeptide ABC transporter, substrate binding protein	540	4e-05	0.29	0.50
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDP----NLIT-----------------YLRESNEEMNPNKRLESLVKAEEVLDAQQPLTPLYHDGQ M ++V ++P TR++ NGN+DI +G + + DP +L T + +S + KR L KAE++L +++ + PLY+ + MKVSVANVPFKTRLNRSTNGNFDIVVSGWSADFADPISFVDLFTSKNANNNGKWSNAQYDKLIADSKTTTDNTKRWNDLEKAEKILLSEEGIAPLYYKTE AWMVR AW+VR AWLVR
Show aligned area	218901396	Bacillus cereus AH820	putative oligopeptide ABC transporter, oligopeptide-binding protein	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	49479177	Bacillus thuringiensis serovar konkukian str. 97-27	solute-binding family 5 protein	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	49183229	Bacillus anthracis str. Sterne	oligopeptide ABC transporter, oligopeptide-binding protein, putative	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	47525453	Bacillus anthracis str. 'Ames Ancestor'	oligopeptide ABC transporter, oligopeptide-binding protein, putative	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	30260381	Bacillus anthracis str. Ames	oligopeptide ABC transporter, oligopeptide-binding protein, putative	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	52145027	Bacillus cereus E33L	solute-binding family 5 protein	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	90962856	Lactobacillus salivarius UCC118	oligopeptide-binding protein oppA	544	4e-04	0.30	0.47
INVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYL------------------------RESNEEMN-PNKRLESLVKAEEVLDAQQPLTPLYHD ++V+++P + +S GNYDI +G + DP IT++ + NE+ N NKR E LVKA + +A Q +TPLY VSVQNIPGNSALSKARKGNYDIYVSGWGGDFKDP--ITFMQILVTGTSYNYGKYSNKEYDALIEKAQNEDANDANKRWEDLVKAARIFNADQGVTPLYQQ GQAWM ++M TTSYM
Show aligned area	217957764	Bacillus cereus AH187	putative oligopeptide ABC transporter, oligopeptide-binding protein	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDKTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	222093962	Bacillus cereus Q1	bacterial extracellular solute-binding protein, family 5 (SBP_bac_5)	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	42779296	Bacillus cereus ATCC 10987	oligopeptide ABC transporter, oligopeptide-binding protein, putative	546	4e-04	0.28	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	218895317	Bacillus cereus G9842	putative oligopeptide ABC transporter, oligopeptide-binding protein	546	5e-04	0.27	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +N+K P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNIKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIAKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	218230899	Bacillus cereus B4264	putative oligopeptide ABC transporter, oligopeptide-binding protein	546	5e-04	0.27	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +N+K P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNIKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIAKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	30018453	Bacillus cereus ATCC 14579	oligopeptide-binding protein oppA	546	6e-04	0.27	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +N+K P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNIKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIAKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	163938192	Bacillus weihenstephanensis KBAB4	4-phytase	546	6e-04	0.27	0.48
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEM-------------NPNKRLESLVKAEEVLDAQQPLTPLY + +N+K P+ +VS +L G+Y+IG G + + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNIKPQPRKQQVSLLLKGDYEIGIDGWSPDFADP--ITFLELFTTNNPYNLDHYSNKEFDDTIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER
Show aligned area	118475960	Bacillus thuringiensis str. Al Hakam	oligopeptide transporter, periplasmic-binding protein	546	9e-04	0.28	0.47
MVINVKSMPKTTRVSNMLNGNYDIGFTGLTTSYNDPNLITYLR------------ESNEEMNPN-------------KRLESLVKAEEVLDAQQPLTPLY + +NVK P+ +VS +L G+Y+IG G + DP IT+L SN+E + R E+L+ +E++L + PLY LTVNVKPQPRKQQVSLLLKGDYEIGIDGWRPDFADP--ITFLELFTTNNPYNLDHYSNKEFDETIEKVKTTLAGDEKARWEALLASEKILFKDSVIAPLY HDGQAWMVR G++++ R QKGESYLER